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Protein Overview: tef-PA

General Information:
Name(s) found: tef-PA / FBpp0086165 [FlyBase]
Description(s) found:
Found 22 descriptions.
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  • The gene teflon is referred to in FlyBase by the symbol Dmel\tef (CG8961, FBgn0086350). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:12942048..12944329. It has the cytological map location 53F2-53F5. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: zinc ion binding. There is experimental evidence that it is involved in the biological process</span>: male meiosis I; male meiosis chromosome segregation. 12 alleles are reported. The phenotypes of these alleles are annotated with: meiosis I; spermatocyte. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 649 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: male meiosis chromosome segregation [IMP]
    male meiosis I [IMP]
    synapsis [NAS]
    Molecular Function: zinc ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKFLDMLSG SQCVSLEKCG DVVVSTNDCM IALYCHFCRD LFTQLPEFLR HLQSNHSDVL  60
   61 HFTKEHNVYS VEELLSGEQG KAHEDAQSAG HNSSSGDSSS LMNSEDSRAI EGSEDNSDNS 120
  121 PMKPEQIGKQ SEINLLAEVT NILLQTNDKE LKPENGVFNR PRKKANNESS SLKICDLKSH 180
  181 TIARTSRKRM SMVKNRILRV LDSDLSAKLE IKPPEPNSKL SITEPIQEDN IPGTCFDTPT 240
  241 KPIPSSSQLS VRKSSLTEAN QICTKYAEKK TAPTMPKLLN CVPKPILTSQ QAHTNAEISE 300
  301 INETYHLAAS QVTKTTKTFP VKITQIDILQ PVKLPKTLIT PINEEGVSDQ VENSTNNINN 360
  361 AQSLPKENTK KFFKKRSELG IKAQGSPNKF FKIIKSKANP IIVKRVQTTS AKASTNKIQI 420
  421 RSNDKTNCFA SEFNSTKIRK LKMENCVDLK SEDPCANTNT RLNKLATISS CEILKAVGLP 480
  481 AITDNPIEDT LLPDELETIR KKADQFIKIY RKYDSIWNYR KICPPAKPDF ISQQIFALTR 540
  541 EVNKTMLCNL ANSDIKGIIN QISVWHYNIY TQYIDLDTIS ENARYTLKLF SFLPVSFAYF 600
  601 CKCCDDIFIL KKEYLKHLIS HQVRFQCTKC IKVFKYKGYY EKHLRNAHS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..211] MSA 2.098993 View MSA. No confident structure predictions are available.
    2 View Details [212..368] MSA 4.441991 View MSA. No confident structure predictions are available.
    3 View Details [369..485] deduced N/A No confident structure predictions are available.
    4 View Details [486..649] PSI-BLAST 24.154902 No description for 2i13A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle