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View Structure Prediction Details

Protein: tef-PA
Organism: Drosophila melanogaster
Length: 649 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tef-PA.

Description E-value Query
Range
Subject
Range
gi|56417388 - gi|56417388|gb|AAV90635.1| Tef [Drosophila melanogaster]
305.0 [0..1] [649..1]

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Predicted Domain #1
Region A:
Residues: [1-211]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKFLDMLSG SQCVSLEKCG DVVVSTNDCM IALYCHFCRD LFTQLPEFLR HLQSNHSDVL  60
   61 HFTKEHNVYS VEELLSGEQG KAHEDAQSAG HNSSSGDSSS LMNSEDSRAI EGSEDNSDNS 120
  121 PMKPEQIGKQ SEINLLAEVT NILLQTNDKE LKPENGVFNR PRKKANNESS SLKICDLKSH 180
  181 TIARTSRKRM SMVKNRILRV LDSDLSAKLE I

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [212-368]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KPPEPNSKLS ITEPIQEDNI PGTCFDTPTK PIPSSSQLSV RKSSLTEANQ ICTKYAEKKT  60
   61 APTMPKLLNC VPKPILTSQQ AHTNAEISEI NETYHLAASQ VTKTTKTFPV KITQIDILQP 120
  121 VKLPKTLITP INEEGVSDQV ENSTNNINNA QSLPKEN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [369-485]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TKKFFKKRSE LGIKAQGSPN KFFKIIKSKA NPIIVKRVQT TSAKASTNKI QIRSNDKTNC  60
   61 FASEFNSTKI RKLKMENCVD LKSEDPCANT NTRLNKLATI SSCEILKAVG LPAITDN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [486-649]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PIEDTLLPDE LETIRKKADQ FIKIYRKYDS IWNYRKICPP AKPDFISQQI FALTREVNKT  60
   61 MLCNLANSDI KGIINQISVW HYNIYTQYID LDTISENARY TLKLFSFLPV SFAYFCKCCD 120
  121 DIFILKKEYL KHLISHQVRF QCTKCIKVFK YKGYYEKHLR NAHS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 24.154902
Match: 2i13A
Description: No description for 2i13A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle