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View Structure Prediction Details

Protein: tef-PA
Organism: Drosophila melanogaster
Length: 649 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tef-PA.

Description E-value Query
Range
Subject
Range
gi|56417388 - gi|56417388|gb|AAV90635.1| Tef [Drosophila melanogaster]
305.0 [0..1] [649..1]

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Predicted Domain #1
Region A:
Residues: [1-211]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKFLDMLSG SQCVSLEKCG DVVVSTNDCM IALYCHFCRD LFTQLPEFLR HLQSNHSDVL  60
   61 HFTKEHNVYS VEELLSGEQG KAHEDAQSAG HNSSSGDSSS LMNSEDSRAI EGSEDNSDNS 120
  121 PMKPEQIGKQ SEINLLAEVT NILLQTNDKE LKPENGVFNR PRKKANNESS SLKICDLKSH 180
  181 TIARTSRKRM SMVKNRILRV LDSDLSAKLE I

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [212-368]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KPPEPNSKLS ITEPIQEDNI PGTCFDTPTK PIPSSSQLSV RKSSLTEANQ ICTKYAEKKT  60
   61 APTMPKLLNC VPKPILTSQQ AHTNAEISEI NETYHLAASQ VTKTTKTFPV KITQIDILQP 120
  121 VKLPKTLITP INEEGVSDQV ENSTNNINNA QSLPKEN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [369-485]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TKKFFKKRSE LGIKAQGSPN KFFKIIKSKA NPIIVKRVQT TSAKASTNKI QIRSNDKTNC  60
   61 FASEFNSTKI RKLKMENCVD LKSEDPCANT NTRLNKLATI SSCEILKAVG LPAITDN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [486-649]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PIEDTLLPDE LETIRKKADQ FIKIYRKYDS IWNYRKICPP AKPDFISQQI FALTREVNKT  60
   61 MLCNLANSDI KGIINQISVW HYNIYTQYID LDTISENARY TLKLFSFLPV SFAYFCKCCD 120
  121 DIFILKKEYL KHLISHQVRF QCTKCIKVFK YKGYYEKHLR NAHS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 24.154902
Match: 2i13A
Description: No description for 2i13A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle