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Protein Overview: CG8963-PC, CG896...

General Information:
Name(s) found: CG8963-PC / FBpp0289800 [FlyBase]
CG8963-PB / FBpp0086168 [FlyBase]
CG8963-PA / FBpp0086167 [FlyBase]
Description(s) found:
Found 42 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG8963 (CG8963, FBgn0034181). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:12903851..12907033. It has the cytological map location 53E4. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: protein binding. There is experimental evidence that it is involved in the biological process</span>: inter-male aggressive behavior; startle response; brain morphogenesis; olfactory behavior; locomotion involved in locomotory behavior. 3 alleles are reported. No phenotypic data is available. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG8963 (CG8963, FBgn0034181). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:12903851..12907033. It has the cytological map location 53E4. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: protein binding. There is experimental evidence that it is involved in the biological process</span>: inter-male aggressive behavior; startle response; brain morphogenesis; olfactory behavior; locomotion involved in locomotory behavior. 3 alleles are reported. No phenotypic data is available. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG8963 (CG8963, FBgn0034181). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:12903851..12907033. It has the cytological map location 53E4. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: protein binding. There is experimental evidence that it is involved in the biological process</span>: inter-male aggressive behavior; startle response; brain morphogenesis; olfactory behavior; locomotion involved in locomotory behavior. 3 alleles are reported. No phenotypic data is available. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 559 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: RNA metabolic process [IEA]
    locomotion involved in locomotory behavior [IMP]
    startle response [IMP]
    brain morphogenesis [IMP]
    olfactory behavior [IMP]
    inter-male aggressive behavior [IMP]
    Molecular Function: protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSCRAPFQPD DQYEQLRRPN VGGAGGVAMP GLDQQAHLFG EYAGAQAYGQ VVGNFPVQAM  60
   61 QPQAQTLSDA SNLSATATIF IPRGAAPPQQ QSRHQQYQQA GGAGGGAPYG QQQPRYVNGF 120
  121 KHHHQQHHQQ PHYNHHHNHQ QKFNNDMQKL TNSVQNRLHL NSQQGSAGNY YQQQQVHQNT 180
  181 HHHQQHQQQH QPHNQHAKFQ RHFHLNNSFQ QIVQQTQHNQ PQQPHHQQHN QQQQQYIQNQ 240
  241 NQQPQPSTST AAASSSSSNS SQPDMATIAL EYLDTVIHCL NQNPGQFDSI ASRFLTIFDG 300
  301 MENNQFVLSI AMEDIFEKSI EQPNFRYMGA KLYNLLHMLN SKPDSLFHTL LKCKLDYHQE 360
  361 EVTKYMRSNE QQKVRETALF LAELYMQLRG DDDSRIQLIA VNIVYSLSKL LASESNENVR 420
  421 CLCQTLKLAG YDLTADCPKD IQEIITALQA IELKSPGKYP MAASVIALQQ NNWGRKVSNA 480
  481 LGDDEDTVKE PPRLSDEPVF YGPDGRELTA EETDFLAGGD NDGDDDFDGD GADLEIDAEM 540
  541 DEETERAYKE FCKQGKQKT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..258] PSI-BLAST 3.39794 No description for 1y0fA was found.
    2 View Details [259..559] PSI-BLAST 74.30103 Eukaryotic initiation factor eIF4G

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.29040336175225 bayes_pls_golite062009
  • protein binding
    		•  1.041337870941 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle