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Protein Overview: FBpp0309066, Nup...

General Information:
Name(s) found: FBpp0309066 [FlyBase]
Nup62-PA / FBpp0086294 [FlyBase]
Description(s) found:
Found 27 descriptions.
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  • type=protein; loc=2R:12232086..12233270; ID=FBpp0309066; name=Nup62-PB; parent=FBgn0034118,FBtr0340060; dbxref=FlyBase:FBpp0309066,FlyBase_Annotation_IDs:CG6251-PB; MD5=c12e45b9e3831e5ad360717dbacb2d8b; length=394; release=r5.56; species=Dmel; [FlyBase]
  • The gene Nup62 is referred to in FlyBase by the symbol Dmel\Nup62 (CG6251, FBgn0034118). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:12231882..12233333. It has the cytological map location 53C1. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: structural constituent of nuclear pore. There is experimental evidence that it is involved in the biological process</span>: phagocytosis, engulfment. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 394 amino acids

    Gene Ontology:
    Cellular Component: nuclear pore [ISS][NAS]
    Biological Process: phagocytosis, engulfment [IMP]
    Molecular Function: structural constituent of nuclear pore [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVFQLPTTTA APTGGATSSF SFGLSTGTPA AAPASGAATT APATKTTFSF GTPAPTAGIG  60
   61 GGDADNSKAQ APPAFGFGLG SGTASAPLTL GTQAAANPAS TTSATATGTS AAPPAFGGFT 120
  121 AQPAASVVPT IATSAPNTAA TTTGLLGGSG LGAPKTTAAA STTLTAAPSA IASTQGAAPA 180
  181 PTLSTGGAFA NLTTETKTTD SSAVSTASQL SYHQLEEHIN KWTLEFEEQE KVFTEQATQI 240
  241 NAWDKLLISN NGKIVELNDA VKKVKTDQQV LDQELEFIAT QQKELEDSLG PLEKEFVNLP 300
  301 RVDMERSQTY LMVENLDTQL KQMSEDLKEI IDNLNEANKG QDTTDPIIQI GKILNAHMNS 360
  361 LQWIESQSTN ISKKLEDIGK IQDSQKRDIF RAPF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..156] MSA 19.176997 View MSA. No confident structure predictions are available.
    2 View Details [157..394] PSI-BLAST 17.221849 Heavy meromyosin subfragment


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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