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Protein Overview: Hmgs-PC, Hmgs-PA...

General Information:
Name(s) found: FBpp0309065 [FlyBase]
Hmgs-PE / FBpp0086293 [FlyBase]
Hmgs-PD / FBpp0086292 [FlyBase]
Hmgs-PB / FBpp0086291 [FlyBase]
Hmgs-PC / FBpp0086290 [FlyBase]
Hmgs-PA / FBpp0086289 [FlyBase]
Description(s) found:
Found 82 descriptions.
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  • type=protein; loc=2R:12226985..12228382; ID=FBpp0309065; name=Hmgs-PF; parent=FBgn0010611,FBtr0340059; dbxref=FlyBase:FBpp0309065,FlyBase_Annotation_IDs:CG4311-PF; MD5=52b78f142182a133def767eed988ccb5; length=465; release=r5.56; species=Dmel; [FlyBase]
  • The gene HMG Coenzyme A synthase is referred to in FlyBase by the symbol Dmel\Hmgs (CG4311, FBgn0010611). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:12223595..12228760. It has the cytological map location 53C1. Based on sequence similarity, it is predicted to have molecular function</span>: hydroxymethylglutaryl-CoA synthase activity. There is experimental evidence that it is involved in the biological process</span>: embryonic development via the syncytial blastoderm. 8 alleles are reported. No phenotypic data is available. It has 5 annotated transcripts and 5 annotated polypeptides. [FlyBase]
  • The gene HMG Coenzyme A synthase is referred to in FlyBase by the symbol Dmel\Hmgs (CG4311, FBgn0010611). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:12223595..12228760. It has the cytological map location 53C1. Based on sequence similarity, it is predicted to have molecular function</span>: hydroxymethylglutaryl-CoA synthase activity. There is experimental evidence that it is involved in the biological process</span>: embryonic development via the syncytial blastoderm. 8 alleles are reported. No phenotypic data is available. It has 5 annotated transcripts and 5 annotated polypeptides. [FlyBase]
  • The gene HMG Coenzyme A synthase is referred to in FlyBase by the symbol Dmel\Hmgs (CG4311, FBgn0010611). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:12223595..12228760. It has the cytological map location 53C1. Based on sequence similarity, it is predicted to have molecular function</span>: hydroxymethylglutaryl-CoA synthase activity. There is experimental evidence that it is involved in the biological process</span>: embryonic development via the syncytial blastoderm. 8 alleles are reported. No phenotypic data is available. It has 5 annotated transcripts and 5 annotated polypeptides. [FlyBase]
  • The gene HMG Coenzyme A synthase is referred to in FlyBase by the symbol Dmel\Hmgs (CG4311, FBgn0010611). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:12223595..12228760. It has the cytological map location 53C1. Based on sequence similarity, it is predicted to have molecular function</span>: hydroxymethylglutaryl-CoA synthase activity. There is experimental evidence that it is involved in the biological process</span>: embryonic development via the syncytial blastoderm. 8 alleles are reported. No phenotypic data is available. It has 5 annotated transcripts and 5 annotated polypeptides. [FlyBase]
  • The gene HMG Coenzyme A synthase is referred to in FlyBase by the symbol Dmel\Hmgs (CG4311, FBgn0010611). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:12223595..12228760. It has the cytological map location 53C1. Based on sequence similarity, it is predicted to have molecular function</span>: hydroxymethylglutaryl-CoA synthase activity. There is experimental evidence that it is involved in the biological process</span>: embryonic development via the syncytial blastoderm. 8 alleles are reported. No phenotypic data is available. It has 5 annotated transcripts and 5 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 465 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: embryonic development via the syncytial blastoderm [IMP]
    isoprenoid biosynthetic process [IEA]
    Molecular Function: hydroxymethylglutaryl-CoA synthase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASHWPENVG IRAIEILFPS QYVDQTELET FDGASAGKYT IGLGQAKMGF CSDREDVNSL  60
   61 CLTVVSRLLE RQHVKHSEIG RLEVGTETIV DKSKSVKSVL MQLFAESGNT DIEGIDTTNA 120
  121 CYGGTAALFN AVNWVESSSW DGRLALAVCA DIAVYAKGAA RPTGGAGAVA MLVGPNAPLI 180
  181 LDRGLRATHM EHAYDFYKPD LSSEYPTVDG KLSIQCYLSA LDTCYRLYRK KFDQQQKDTS 240
  241 KQPASLSTFD AILFHTPFCK LVQKSVGRLS FNDFLLSSEE ERTKQFPDLE RFNTATLEST 300
  301 YFDRDVEKAF MTQSANIFAS KTKKSLLLAN QVGNMYTPSV YSGLVSLLIS GPAQELVGKR 360
  361 IGLFSYGSGL AASMYSISVT QDAAAFEKFV SQLDYVQPLL NSREKVAPEQ FSALMEVREK 420
  421 NNHAAPYTPT GSISALFPGT YYLKDVDALH RRTYERTPTI SNGVH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

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    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..465] PSI-BLAST 108.0 No description for 2p8uA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle