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Protein Overview: fus-PC

General Information:
Name(s) found: fus-PC / FBpp0086478 [FlyBase]
Description(s) found:
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  • gi|24653901|ref|NP_725479.1| fusilli, isoform C [Drosophila melanogaster] [NCBI NR]
  • gi|21645394|gb|AAM70980.1| fusilli, isoform C [Drosophila melanogaster] [NCBI NR]
  • The gene fusilli is referred to in FlyBase by the symbol Dmel\fus (CG8205, FBgn0023441). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:11544823..11564198. It has the cytological map location 52B3-52B5. Based on sequence similarity, it is predicted to have molecular function</span>: mRNA binding. There is experimental evidence that it is involved in the biological process</span>: epidermal growth factor receptor signaling pathway. 34 alleles are reported. No phenotypic data is available. It has 7 annotated transcripts and 7 annotated polypeptides. [FlyBase]
  • >CG8205-PC translation from_gene[CG8205 fus FBgn0023441] seq_release:3 mol_weight=95453 cds_boundaries:(2R:10,721,695..10,735,845[-]) aa_length:891 transcript_info:[CG8205-RC seq_release:3] gene_info:[gene symbol:fus FBgn0023441 gene_boundaries:(2R:10, [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q8MLA9) CG8205-PC [DrosMelano7227.FASTAC.txt]
  • CG8205-PC, isoform C [Drosophila melanogaster]gi|24653901|ref|NP_725479.1| CG8205-PC [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:complement(11545472..11545906,11546115..11546353,11550429..11550675,11550737..11551303,11551424..11551694,11551829..11551939,11552818..11552872,11552930..11553019,11553216..11553492,11555116..11555370,11559497..11559625); ID=FBpp00864 [fly-100309-contam.fasta]
  • fusilli CG8205-PC, isoform C [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG8205-PC, isoform C [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2R:complement(11545472..11545906,11546115..11546353,11550429..11550675,11550737..11551303,11551424..11551694,11551829..11551939,11552818..11552872,11552930..11553019,11553216..11553492,11555116..11555370,11559497..11559625); ID=FBpp0086478; name=fus-PC; parent=FBgn0023441,FBtr0087345; dbxref=FlyBase:FBpp0086478,FlyBase_Annotation_IDs:CG8205-PC,GB_protein:AAM70980.1,REFSEQ:NP_725479,GB_protein:AAM70980; MD5=94c4bd50ea04a8405c67823201df3667; length=891; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:complement(11545472..11545906,11546115..11546353,11550429..11550675,11550737..11551303,11551424..11551694,11551829..11551939,11552818..11552872,11552930..11553019,11553216..11553492,11555116..11555370,11559497..11559625); ID=FBpp0086478; name=fus-PC; parent=FBgn0023441,FBtr0087345; dbxref=FlyBase:FBpp0086478,FlyBase_Annotation_IDs:CG8205-PC,GB_protein:AAM70980.1,REFSEQ:NP_725479,GB_protein:AAM70980; MD5=94c4bd50ea04a8405c67823201df3667; length=891; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Isoform C of RNA-binding protein fusilli OS=Drosophila melanogaster GN=fus [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2R:complement(11545472..11545906,11546115..11546353,11550429..11550675,11550737..11551303,11551424..11551694,11551829..11551939,11552818..11552872,11552930..11553019,11553216..11553492,11555116..11555370,11559497..11559625); ID=FBpp0086478; name=fus-PC; parent=FBgn0023441,FBtr0087345; dbxref=FlyBase:FBpp0086478,FlyBase_Annotation_IDs:CG8205-PC,GB_protein:AAM70980.1,REFSEQ:NP_725479,GB_protein:AAM70980,FlyMine:FBpp0086478,modMine:FBpp0086478; MD5=94c4bd50ea04a8405c67823201df3667; length=891; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:complement(join(15671992..15672120,15667611..15667865,15665711..15665987,15665425..15665514,15665313..15665367,15664324..15664434,15663919..15664189,15663232..15663798,15662924..15663170,15658610..15658848,15657967..15658401)); ID=FBpp0086478; name=fus-PC; parent=FBgn0023441,FBtr0087345; dbxref=FlyBase:FBpp0086478,FlyBase_Annotation_IDs:CG8205-PC,GB_protein:AAM70980.1,REFSEQ:NP_725479,GB_protein:AAM70980,FlyMine:FBpp0086478,modMine:FBpp0086478; MD5=94c4bd50ea04a8405c67823201df3667; length=891; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:complement(join(15671992..15672120,15667611..15667865,15665711..15665987,15665425..15665514,15665313..15665367,15664324..15664434,15663919..15664189,15663232..15663798,15662924..15663170,15658610..15658848,15657967..15658401)); ID=FBpp0086478; name=fus-PC; parent=FBgn0023441,FBtr0087345; dbxref=FlyBase:FBpp0086478,FlyBase_Annotation_IDs:CG8205-PC,GB_protein:AAM70980.1,REFSEQ:NP_725479,GB_protein:AAM70980,FlyMine:FBpp0086478,modMine:FBpp0086478; MD5=94c4bd50ea04a8405c67823201df3667; length=891; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Isoform of Q9BJZ5, Isoform C of RNA-binding protein fusilli OS=Drosophila melanogaster GN=fus [DROME.fasta.20160308]
  • FBpp0086478 type=protein; loc=2R:complement(join(15671992..15672120,15667611..15667865,15665711..15665987,15665425..15665514,15665313..15665367,15664324..15664434,15663919..15664189,15663232..15663798,15662924..15663170,15658610..15658848,15657967..15658401)); ID=FBpp0086478; name=fus-PC; parent=FBgn0023441,FBtr0087345; dbxref=FlyBase:FBpp0086478,FlyBase_Annotation_IDs:CG8205-PC,GB_protein:AAM70980.1,REFSEQ:NP_725479,GB_protein:AAM70980,FlyMine:FBpp0086478,modMine:FBpp0086478; MD5=94c4bd50ea04a8405c67823201df3667; length=891; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:complement(join(15671992..15672120,15667611..15667865,15665711..15665987,15665425..15665514,15665313..15665367,15664324..15664434,15663919..15664189,15663232..15663798,15662924..15663170,15658610..15658848,15657967..15658401)); ID=FBpp0086478; name=fus-PC; parent=FBgn0023441,FBtr0087345; dbxref=FlyBase:FBpp0086478,FlyBase_Annotation_IDs:CG8205-PC,GB_protein:AAM70980.1,REFSEQ:NP_725479,GB_protein:AAM70980,FlyMine:FBpp0086478,modMine:FBpp0086478; MD5=94c4bd50ea04a8405c67823201df3667; length=891; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 891 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQVPEHVVSL YIATCGQNGS GLGSDEKEII LLVFVLLEVS TGQIVGTKQI LVRPDGYFIK  60
   61 DRTISSSSDN SSVTNNTASS PPLAIGDANN GSGSTSGNGN SLENGSELIL PIAEAQAAGK 120
  121 PLSEAIEEFD AYLRSLSLHD TEIKLVTDGQ LPLRQCLHRE ASAKDVELPA YYNRFSDLRK 180
  181 EFLRYKSGDL ARALVPVKDV KKMLQAPTLP MPQSIAEMLG ELNISSVEDN DFYIRESRDM 240
  241 VTVIQTLLQA GHKFAANELV NLVLEPGICS IDDEVDGNCI VRARGLPWQS SDQDIAKFFR 300
  301 GLNVAKGGVA LCLSPLGRRN GEALIRFVCQ EHRDMALKRH KHHIGTRYIE VYRASGEDFL 360
  361 AIAGGASNEA QAFLSKGAQV IIRMRGLPYD ATAKQVLDFF TTGDTPPCHV LDGNEGVLFV 420
  421 KKPDGRATGD AFVLFANETD APKALGRHRE SIGQRYIELF RSTTAEVQQV LNRSMDPKNY 480
  481 ESGGGHSQPP LIAQLPTMQL PLLPQVGAHS LSHSLGASPA NLCPPVPPPA LPLPTQHLIT 540
  541 SGTTKNCIRL RGLPYEAMVE HILHFLDDFA KHIIYQGVHM VINAQGQPSG EAFIQMDLEE 600
  601 SARLCAQRRH NHYMMFGKKY RYIEVFQCSG DDMNMVLNGG LASPVAQPPP PHLGHAHKQQ 660
  661 SLLAATTGAT VLGAHYGGPF PAYGAAPPPP PPHTPLLATP RSHHHPHHHP ASAFYPAPLV 720
  721 YWPYPSPPVS PTTYYSQPGA HSPSQAMYPL DFFPPSPLSP PNVSIPNTST GLILTPTKAA 780
  781 VSFVPPKQFS PSSTGSGSPS SSSVKLAGQA GPAHMPSIAV NGKTEGVTST GAKDTSTPQE 840
  841 TSASQTLLSI DTNHATPTTA AAPPLKTGSQ GSAGAAATPL VTNSCVELYI S

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..265] FFAS03 5.95 No description for 1zbuA was found.
    2 View Details [266..475] PSI-BLAST 55.0 Nuclear ribonucleoprotein A1 (RNP A1, UP1)
    3 View Details [476..640] FFAS03 3.21 No description for 2hglA was found.
    4 View Details [641..713] deduced N/A No confident structure predictions are available.
    5 View Details [714..891] PSI-BLAST 7.522879 Sec24

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.950788308762215 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.29562225149076 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle