| Protein: | fus-PC |
| Organism: | Drosophila melanogaster |
| Length: | 891 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fus-PC.
| Description | E-value | Query Range |
Subject Range |
|
|
373.0 | [0..1] | [693..1] |
|
Region A: Residues: [1-265] |
1 11 21 31 41 51
| | | | | |
1 MQVPEHVVSL YIATCGQNGS GLGSDEKEII LLVFVLLEVS TGQIVGTKQI LVRPDGYFIK 60
61 DRTISSSSDN SSVTNNTASS PPLAIGDANN GSGSTSGNGN SLENGSELIL PIAEAQAAGK 120
121 PLSEAIEEFD AYLRSLSLHD TEIKLVTDGQ LPLRQCLHRE ASAKDVELPA YYNRFSDLRK 180
181 EFLRYKSGDL ARALVPVKDV KKMLQAPTLP MPQSIAEMLG ELNISSVEDN DFYIRESRDM 240
241 VTVIQTLLQA GHKFAANELV NLVLE
|
| Detection Method: |  |
| Confidence: | 5.95 |
| Match: | 1zbuA |
| Description: | No description for 1zbuA was found. |
|
Region A: Residues: [266-475] |
1 11 21 31 41 51
| | | | | |
1 PGICSIDDEV DGNCIVRARG LPWQSSDQDI AKFFRGLNVA KGGVALCLSP LGRRNGEALI 60
61 RFVCQEHRDM ALKRHKHHIG TRYIEVYRAS GEDFLAIAGG ASNEAQAFLS KGAQVIIRMR 120
121 GLPYDATAKQ VLDFFTTGDT PPCHVLDGNE GVLFVKKPDG RATGDAFVLF ANETDAPKAL 180
181 GRHRESIGQR YIELFRSTTA EVQQVLNRSM
|
| Detection Method: | |
| Confidence: | 55.0 |
| Match: | 1l3kA |
| Description: | Nuclear ribonucleoprotein A1 (RNP A1, UP1) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
|
Region A: Residues: [476-640] |
1 11 21 31 41 51
| | | | | |
1 DPKNYESGGG HSQPPLIAQL PTMQLPLLPQ VGAHSLSHSL GASPANLCPP VPPPALPLPT 60
61 QHLITSGTTK NCIRLRGLPY EAMVEHILHF LDDFAKHIIY QGVHMVINAQ GQPSGEAFIQ 120
121 MDLEESARLC AQRRHNHYMM FGKKYRYIEV FQCSGDDMNM VLNGG
|
| Detection Method: | |
| Confidence: | 3.21 |
| Match: | 2hglA |
| Description: | No description for 2hglA was found. |
|
Region A: Residues: [641-713] |
1 11 21 31 41 51
| | | | | |
1 LASPVAQPPP PHLGHAHKQQ SLLAATTGAT VLGAHYGGPF PAYGAAPPPP PPHTPLLATP 60
61 RSHHHPHHHP ASA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [714-891] |
1 11 21 31 41 51
| | | | | |
1 FYPAPLVYWP YPSPPVSPTT YYSQPGAHSP SQAMYPLDFF PPSPLSPPNV SIPNTSTGLI 60
61 LTPTKAAVSF VPPKQFSPSS TGSGSPSSSS VKLAGQAGPA HMPSIAVNGK TEGVTSTGAK 120
121 DTSTPQETSA SQTLLSIDTN HATPTTAAAP PLKTGSQGSA GAAATPLVTN SCVELYIS
|
| Detection Method: | |
| Confidence: | 7.522879 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
