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Protein Overview: Obp50a-PA

General Information:
Name(s) found: Obp50a-PA / FBpp0086685 [FlyBase]
Description(s) found:
Found 19 descriptions.
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  • The gene Odorant-binding protein 50a is referred to in FlyBase by the symbol Dmel\Obp50a (CG30067, FBgn0050067). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:10257869..10258529. It has the cytological map location 50F6. Based on sequence similarity, it is predicted to have molecular function</span>: odorant binding. Based on sequence similarity, it is predicted to be involved in the biological process</span>: sensory perception of chemical stimulus. 2 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 181 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: sensory perception of chemical stimulus [UNKNOWN]
    Molecular Function: odorant binding [UNKNOWN]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTGRILVAL IFLGLIIPFR AAKCRAAPKS VQNVHVCCSA PLPNWGVFNR ECHKSAIQAS  60
   61 CRLDCDFNAS SVLQGNRLIQ AKVRPMLERA FSNEPTIDAY ESNFAKCSTV VRSKYQELSP 120
  121 LSRQSDACDR HALFYSLCAY ARLIFTCPDK MWQRNNRMCQ EAKAYAKKCP WPALKMFMRN 180
  181 T

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..181] FFAS03 1.71 Pheromone binding protein

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • odorant binding
    		•  4.34740138836018 bayes_pls_golite062009
  • pheromone binding
    		•  2.50061185527994 bayes_pls_golite062009
  • binding
    		•  1.71868583149917 bayes_pls_golite062009
  • phenylalkylamine binding
    		•  1.10044668642283 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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