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View Structure Prediction Details

Protein: Obp50a-PA
Organism: Drosophila melanogaster
Length: 181 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Obp50a-PA.

Description E-value Query
Range
Subject
Range
Obp50a-PB - The gene Odorant-binding protein 50a is referred to in FlyBase by the symbol Dmel\Obp50a (CG30067, F...
156.0 [0..1] [181..1]

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Predicted Domain #1
Region A:
Residues: [1-181]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTGRILVAL IFLGLIIPFR AAKCRAAPKS VQNVHVCCSA PLPNWGVFNR ECHKSAIQAS  60
   61 CRLDCDFNAS SVLQGNRLIQ AKVRPMLERA FSNEPTIDAY ESNFAKCSTV VRSKYQELSP 120
  121 LSRQSDACDR HALFYSLCAY ARLIFTCPDK MWQRNNRMCQ EAKAYAKKCP WPALKMFMRN 180
  181 T

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Detection Method: FFAS03
Confidence: 1.71
Match: 1gm0A
Description: Pheromone binding protein
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
odorant binding 4.34740138836018 bayes_pls_golite062009
pheromone binding 2.50061185527994 bayes_pls_golite062009
binding 1.71868583149917 bayes_pls_golite062009
phenylalkylamine binding 1.10044668642283 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle