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Protein Overview: CG13349-PF, CG13...

General Information:
Name(s) found: CG13349-PF / FBpp0112987 [FlyBase]
CG13349-PB / FBpp0086737 [FlyBase]
CG13349-PA / FBpp0086736 [FlyBase]
Description(s) found:
Found 46 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG13349 (CG13349, FBgn0033886). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:9846033..9847909. It has the cytological map location 50C17-50C18. Based on sequence similarity, it is predicted to have molecular function</span>: proteasome activator activity. Based on sequence similarity, it is predicted to be involved in the biological process</span>: proteasome assembly. 2 alleles are reported. The phenotype of these alleles is annotated with: intersegmental nerve. It has 5 annotated transcripts and 5 annotated polypeptides. [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG13349 (CG13349, FBgn0033886). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:9846033..9847909. It has the cytological map location 50C17-50C18. Based on sequence similarity, it is predicted to have molecular function</span>: proteasome activator activity. Based on sequence similarity, it is predicted to be involved in the biological process</span>: proteasome assembly. 2 alleles are reported. The phenotype of these alleles is annotated with: intersegmental nerve. It has 5 annotated transcripts and 5 annotated polypeptides. [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG13349 (CG13349, FBgn0033886). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:9846033..9847909. It has the cytological map location 50C17-50C18. Based on sequence similarity, it is predicted to have molecular function</span>: proteasome activator activity. Based on sequence similarity, it is predicted to be involved in the biological process</span>: proteasome assembly. 2 alleles are reported. The phenotype of these alleles is annotated with: intersegmental nerve. It has 5 annotated transcripts and 5 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 389 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    cytoplasm [IEA]
    proteasome complex [ISS]
    Biological Process: proteasome assembly [ISS]
    Molecular Function: proteasome activator activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFGRQSGLGS SSNSSNLVEF RAGRMNMVGK MVHPDPRKGL VYMTQSDDGL MHFCWKDRTS  60
   61 GKVEDDLIVF PDDFEYKRVD QCKTGRVYVL KFKSSTRRMF FWMQEPKTDK DDEQCRRINE 120
  121 LLNNPPSAHQ RGGGGSNDGD LQYMLNNMSQ QQLMQLFGGV GQMGGLSSLL GQMNSRTPSS 180
  181 RNTSSSGGGG ASALQTPENV SVPRTPSAPS KSGSSRSSSN VNSQVGEGAG SSVDADAPGR 240
  241 SLNIDLSTAL PGADAINQII ADPEHVKTLI VHLPESEDVD DDRKQQIKDN ITSPQFQQAL 300
  301 AQFSSALQSA QLGPVIKQFE LSNEAVAAAF SGNLEDFVRA LEKSLPPGAT MGGKPSASEK 360
  361 KASDPETPTS VARDENTDPA TEKQEEKQK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..122] MSA 9.121982 View MSA. No confident structure predictions are available.
    2 View Details [123..389] MSA 22.140997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.75

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle