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Protein Overview: sug-PA

General Information:
Name(s) found: sug-PA / FBpp0086902 [FlyBase]
Description(s) found:
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  • gi|7303383|gb|AAF58441.1| sugarbabe [Drosophila melanogaster] [NCBI NR]
  • gi|19922138|ref|NP_610826.1| sugarbabe [Drosophila melanogaster] [NCBI NR]
  • gi|17862546|gb|AAL39750.1| LD36528p [Drosophila melanogaster] [NCBI NR]
  • gi|122114425|sp|Q7K0S9.1|GLIS2_DROME RecName: Full=Zinc finger protein GLIS2 homolog; AltName: Full=Protein sugarbabe [NCBI NR]
  • Zinc finger protein GLIS2 homolog OS=Drosophila melanogaster GN=sug PE=2 SV=1 [Swiss-Prot]
  • The gene sugarbabe is referred to in FlyBase by the symbol Dmel\sug (CG3850, FBgn0033782). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:8816368..8818151. It has the cytological map location 49E1. Based on sequence similarity, it is predicted to have molecular function</span>: transcription activator activity. Based on sequence similarity, it is predicted to be involved in the biological process</span>: positive regulation of transcription; negative regulation of transcription. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG3850-PA translation from_gene[CG3850 CG3850 FBgn0033782] seq_release:3 mol_weight=44035 cds_boundaries:(2R:7,993,646..7,995,239[+]) aa_length:384 transcript_info:[CG3850-RA seq_release:3] gene_info:[gene symbol:CG3850 FBgn0033782 gene_boundaries:(2R [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9V6I2) CG3850 protein (LD36528p) [DrosMelano7227.FASTAC.txt]
  • (AE003820) CG3850 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG3850-PA [Drosophila melanogaster]gi|17862546|gb|AAL39750.1| LD36528p [Drosophila melanogaster]gi|19922138|ref|NP_610826.1| CG3850-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:join(8816437..8816846,8817289..8818033); ID=FBpp0086902; name=sug-PA; parent=FBgn0033782,FBtr0087789; dbxref=FlyBase:FBpp0086902,FlyBase_Annotation_IDs:CG3850-PA,GB_protein:AAF58441.1,REFSEQ:NP_610826,GB_protein:AAF58441; MD5=7f8b2ac3 [fly-100309-contam.fasta]
  • LD36528p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG3850-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • sugarbabe CG3850-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2R:join(8816437..8816846,8817289..8818033); ID=FBpp0086902; name=sug-PA; parent=FBgn0033782,FBtr0087789; dbxref=FlyBase:FBpp0086902,FlyBase_Annotation_IDs:CG3850-PA,GB_protein:AAF58441.1,REFSEQ:NP_610826,GB_protein:AAF58441; MD5=7f8b2ac34b283d4b122f3544bbf58434; length=384; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:join(8816437..8816846,8817289..8818033); ID=FBpp0086902; name=sug-PA; parent=FBgn0033782,FBtr0087789; dbxref=FlyBase:FBpp0086902,FlyBase_Annotation_IDs:CG3850-PA,GB_protein:AAF58441.1,REFSEQ:NP_610826,GB_protein:AAF58441; MD5=7f8b2ac34b283d4b122f3544bbf58434; length=384; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Zinc finger protein GLIS2 homolog OS=Drosophila melanogaster GN=sug PE=1 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2R:join(8816437..8816846,8817289..8818033); ID=FBpp0086902; name=sug-PA; parent=FBgn0033782,FBtr0087789; dbxref=FlyBase:FBpp0086902,FlyBase_Annotation_IDs:CG3850-PA,GB_protein:AAF58441.1,REFSEQ:NP_610826,GB_protein:AAF58441,FlyMine:FBpp0086902,modMine:FBpp0086902; MD5=7f8b2ac34b283d4b122f3544bbf58434; length=384; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:join(12928932..12929341,12929784..12930528); ID=FBpp0086902; name=sug-PA; parent=FBgn0033782,FBtr0087789; dbxref=FlyBase:FBpp0086902,FlyBase_Annotation_IDs:CG3850-PA,GB_protein:AAF58441.1,REFSEQ:NP_610826,GB_protein:AAF58441,FlyMine:FBpp0086902,modMine:FBpp0086902; MD5=7f8b2ac34b283d4b122f3544bbf58434; length=384; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:join(12928932..12929341,12929784..12930528); ID=FBpp0086902; name=sug-PA; parent=FBgn0033782,FBtr0087789; dbxref=FlyBase:FBpp0086902,FlyBase_Annotation_IDs:CG3850-PA,GB_protein:AAF58441.1,REFSEQ:NP_610826,GB_protein:AAF58441,FlyMine:FBpp0086902,modMine:FBpp0086902; MD5=7f8b2ac34b283d4b122f3544bbf58434; length=384; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0086902 type=protein; loc=2R:join(12928932..12929341,12929784..12930528); ID=FBpp0086902; name=sug-PA; parent=FBgn0033782,FBtr0087789; dbxref=FlyBase:FBpp0086902,FlyBase_Annotation_IDs:CG3850-PA,GB_protein:AAF58441.1,REFSEQ:NP_610826,GB_protein:AAF58441,FlyMine:FBpp0086902,modMine:FBpp0086902; MD5=7f8b2ac34b283d4b122f3544bbf58434; length=384; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:join(12928932..12929341,12929784..12930528); ID=FBpp0086902; name=sug-PA; parent=FBgn0033782,FBtr0087789; dbxref=FlyBase:FBpp0086902,FlyBase_Annotation_IDs:CG3850-PA,GB_protein:AAF58441.1,REFSEQ:NP_610826,GB_protein:AAF58441,UniProt/Swiss-Prot:Q7K0S9,FlyMine:FBpp0086902,modMine:FBpp0086902; MD5=7f8b2ac34b283d4b122f3544bbf58434; length=384; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 384 amino acids

    Gene Ontology:
    Cellular Component: nuclear speck [ISS]
    Biological Process: negative regulation of transcription [ISS]
    positive regulation of transcription [ISS]
    Molecular Function: nucleic acid binding [IEA]
    zinc ion binding [IEA]
    transcription activator activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDIIQKSIFN SGPHSRGIYE PPLGYFTPYN TPPYIAAYSD SGSWLADHHQ HHQQQHQQHQ  60
   61 QQMQHIRFPT PPITPPRPIA GYGYRQRTQS VIMKARGQQD ELCRSPVEFP DDSKSCSSSS 120
  121 ECGTASDFVC NWTDCDRVFD TLDALAQHVT QRHAIASLTD GLYYCRWRGC QRSERGFNAR 180
  181 YKMLVHTRTH TKEKPHRCHL CEKSFSRAEN LKIHIRSHSG EKPYKCSFEG CQKAYSNSSD 240
  241 RFKHTRTHSM EKPYMCKVAG CQKRYTDPSS LRKHVKTFKH SIHLIASQPL TLPSVPCLLE 300
  301 ASSESAFTCL PAASSVESTS SSSSARYYDD SNNEPSDYSL KPKQDAEFSP SYWLGDRQHS 360
  361 YLHSEDFFVK MDVESPLDLR IHRI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..125] PSI-BLAST 16.30103 Solution structure of tandem repeat of the zf-C2H2 domains of human zinc finger protein 297B
    2 View Details [126..305] PSI-BLAST 24.30103 Five-finger GLI1
    3 View Details [306..384] MSA 1.224995 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle