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Protein Overview: Or49b-PA

General Information:
Name(s) found: Or49b-PA / FBpp0086894 [FlyBase]
Description(s) found:
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  • gi|85861101|gb|ABC86500.1| IP02107p [Drosophila melanogaster] [NCBI NR]
  • gi|7303394|gb|AAF58452.1| odorant receptor 49b [Drosophila melanogaster] [NCBI NR]
  • gi|17986095|ref|NP_523721.1| odorant receptor 49b [Drosophila melanogaster] [NCBI NR]
  • gi|12643916|sp|Q9V6H2.1|OR49B_DROME RecName: Full=Odorant receptor 49b [NCBI NR]
  • Odorant receptor 49b OS=Drosophila melanogaster GN=Or49b PE=2 SV=1 [Swiss-Prot]
  • (Q9V6H2) Odorant receptor 49b [Swiss-Prot]
  • The gene Odorant receptor 49b is referred to in FlyBase by the symbol Dmel\Or49b (CG17584, FBgn0028963). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:8730170..8732214. It has the cytological map location 49D4. There is experimental evidence that it has the molecular function</span>: olfactory receptor activity. It is reported to be involved in the biological process</span>: sensory perception of smell. 4 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG17584-PA translation from_gene[CG17584 Or49b FBgn0028963] seq_release:3 mol_weight=43900 cds_boundaries:(2R:7,907,853..7,909,278[+]) aa_length:375 transcript_info:[CG17584-RA seq_release:3] gene_info:[gene symbol:Or49b FBgn0028963 gene_boundaries:(2 [hmr_yeast5_DM3-1_pombe.fasta]
  • (AE003820) Or49b gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG17584-PA [Drosophila melanogaster]gi|17986095|ref|NP_523721.1| CG17584-PA [Drosophila melanogaster]gi|12643916|sp|Q9V6H2|O49B_DROME Odorant receptor 49b [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:join(8730644..8731076,8731181..8731563,8731626..8731835,8731971..8732072); ID=FBpp0086894; name=Or49b-PA; parent=FBgn0028963,FBtr0087781; dbxref=FlyBase:FBpp0086894,FlyBase_Annotation_IDs:CG17584-PA,GB_protein:AAF58452.1,REFSEQ:NP_523 [fly-100309-contam.fasta]
  • CG17584-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • IP02107p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Odorant receptor 49b CG17584-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Odorant receptor 49b [nr-271106-contam.fasta]
  • type=protein; loc=2R:join(8730644..8731076,8731181..8731563,8731626..8731835,8731971..8732072); ID=FBpp0086894; name=Or49b-PA; parent=FBgn0028963,FBtr0087781; dbxref=FlyBase:FBpp0086894,FlyBase_Annotation_IDs:CG17584-PA,GB_protein:AAF58452.1,REFSEQ:NP_523721,GB_protein:AAF58452; MD5=a2f8f8f6f12004c8125d6b6ceb1b22fe; length=375; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:join(8730644..8731076,8731181..8731563,8731626..8731835,8731971..8732072); ID=FBpp0086894; name=Or49b-PA; parent=FBgn0028963,FBtr0087781; dbxref=FlyBase:FBpp0086894,FlyBase_Annotation_IDs:CG17584-PA,GB_protein:AAF58452.1,REFSEQ:NP_523721,GB_protein:AAF58452; MD5=a2f8f8f6f12004c8125d6b6ceb1b22fe; length=375; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • type=protein; loc=2R:join(8730644..8731076,8731181..8731563,8731626..8731835,8731971..8732072); ID=FBpp0086894; name=Or49b-PA; parent=FBgn0028963,FBtr0087781; dbxref=FlyBase:FBpp0086894,FlyBase_Annotation_IDs:CG17584-PA,GB_protein:AAF58452.1,REFSEQ:NP_523721,GB_protein:AAF58452,FlyMine:FBpp0086894,modMine:FBpp0086894; MD5=a2f8f8f6f12004c8125d6b6ceb1b22fe; length=375; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:join(12843139..12843571,12843676..12844058,12844121..12844330,12844466..12844567); ID=FBpp0086894; name=Or49b-PA; parent=FBgn0028963,FBtr0087781; dbxref=FlyBase:FBpp0086894,FlyBase_Annotation_IDs:CG17584-PA,GB_protein:AAF58452.1,REFSEQ:NP_523721,GB_protein:AAF58452,FlyMine:FBpp0086894,modMine:FBpp0086894; MD5=a2f8f8f6f12004c8125d6b6ceb1b22fe; length=375; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:join(12843139..12843571,12843676..12844058,12844121..12844330,12844466..12844567); ID=FBpp0086894; name=Or49b-PA; parent=FBgn0028963,FBtr0087781; dbxref=FlyBase:FBpp0086894,FlyBase_Annotation_IDs:CG17584-PA,GB_protein:AAF58452.1,REFSEQ:NP_523721,GB_protein:AAF58452,FlyMine:FBpp0086894,modMine:FBpp0086894; MD5=a2f8f8f6f12004c8125d6b6ceb1b22fe; length=375; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0086894 type=protein; loc=2R:join(12843139..12843571,12843676..12844058,12844121..12844330,12844466..12844567); ID=FBpp0086894; name=Or49b-PA; parent=FBgn0028963,FBtr0087781; dbxref=FlyBase:FBpp0086894,FlyBase_Annotation_IDs:CG17584-PA,GB_protein:AAF58452.1,REFSEQ:NP_523721,GB_protein:AAF58452,FlyMine:FBpp0086894,modMine:FBpp0086894; MD5=a2f8f8f6f12004c8125d6b6ceb1b22fe; length=375; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:join(12843139..12843571,12843676..12844058,12844121..12844330,12844466..12844567); ID=FBpp0086894; name=Or49b-PA; parent=FBgn0028963,FBtr0087781; dbxref=FlyBase:FBpp0086894,FlyBase_Annotation_IDs:CG17584-PA,GB_protein:AAF58452.1,REFSEQ:NP_523721,GB_protein:AAF58452,UniProt/Swiss-Prot:Q9V6H2,FlyMine:FBpp0086894,modMine:FBpp0086894; MD5=a2f8f8f6f12004c8125d6b6ceb1b22fe; length=375; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 375 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA]
    integral to membrane [NAS]
    Biological Process: sensory perception of smell [IEA][NAS]
    Molecular Function: odorant binding [IEA]
    olfactory receptor activity [IDA][NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFEDIQLIYM NIKILRFWAL LYDKNLRRYV CIGLASFHIF TQIVYMMSTN EGLTGIIRNS  60
   61 YMLVLWINTV LRAYLLLADH DRYLALIQKL TEAYYDLLNL NDSYISEILD QVNKVGKLMA 120
  121 RGNLFFGMLT SMGFGLYPLS SSERVLPFGS KIPGLNEYES PYYEMWYIFQ MLITPMGCCM 180
  181 YIPYTSLIVG LIMFGIVRCK ALQHRLRQVA LKHPYGDRDP RELREEIIAC IRYQQSIIEY 240
  241 MDHINELTTM MFLFELMAFS ALLCALLFML IIVSGTSQLI IVCMYINMIL AQILALYWYA 300
  301 NELREQNLAV ATAAYETEWF TFDVPLRKNI LFMMMRAQRP AAILLGNIRP ITLELFQNLL 360
  361 NTTYTFFTVL KRVYG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..239] MSA 2.306996 View MSA. No confident structure predictions are available.
    2 View Details [240..375] MSA 7.307997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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