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Protein Overview: Obp49a-PA

General Information:
Name(s) found: Obp49a-PA / FBpp0086985 [FlyBase]
Description(s) found:
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  • gi|24653178|ref|NP_610812.1| Odorant-binding protein 49a [Drosophila melanogaster] [NCBI NR]
  • gi|21627344|gb|AAF58469.2| Odorant-binding protein 49a [Drosophila melanogaster] [NCBI NR]
  • gi|21430006|gb|AAM50681.1| GH25962p [Drosophila melanogaster] [NCBI NR]
  • The gene Odorant-binding protein 49a is referred to in FlyBase by the symbol Dmel\Obp49a (CG30052, FBgn0050052). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:8577564..8578460. It has the cytological map location 49B12. Based on sequence similarity, it is predicted to have molecular function</span>: odorant binding. Based on sequence similarity, it is predicted to be involved in the biological process</span>: sensory perception of chemical stimulus. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG30052-PA translation from_gene[CG30052 Obp49a FBgn0050052] seq_release:3 mol_weight=23472 cds_boundaries:(2R:7,754,881..7,755,633[-]) aa_length:212 transcript_info:[CG30052-RA seq_release:3] gene_info:[gene symbol:Obp49a synonyms:[CG8769] FBgn005005 [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9V6F8) CG30052 protein (GH25962p) [DrosMelano7227.FASTAC.txt]
  • CG30052-PA [Drosophila melanogaster]gi|21430006|gb|AAM50681.1| GH25962p [Drosophila melanogaster]gi|24653178|ref|NP_610812.1| CG30052-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:complement(8577670..8578053,8578115..8578321,8578378..8578425); ID=FBpp0086985; name=Obp49a-PA; parent=FBgn0050052,FBtr0087872; dbxref=FlyBase:FBpp0086985,FlyBase_Annotation_IDs:CG30052-PA,GB_protein:AAF58469.2,REFSEQ:NP_610812,GB_pro [fly-100309-contam.fasta]
  • CG30052-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • GH25962p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Odorant-binding protein 49a CG30052-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2R:complement(8577670..8578053,8578115..8578321,8578378..8578425); ID=FBpp0086985; name=Obp49a-PA; parent=FBgn0050052,FBtr0087872; dbxref=FlyBase:FBpp0086985,FlyBase_Annotation_IDs:CG30052-PA,GB_protein:AAF58469.2,REFSEQ:NP_610812,GB_protein:AAF58469; MD5=25b4fb9945055c091c0dc9075371770b; length=212; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:complement(8577670..8578053,8578115..8578321,8578378..8578425); ID=FBpp0086985; name=Obp49a-PA; parent=FBgn0050052,FBtr0087872; dbxref=FlyBase:FBpp0086985,FlyBase_Annotation_IDs:CG30052-PA,GB_protein:AAF58469.2,REFSEQ:NP_610812,GB_protein:AAF58469; MD5=25b4fb9945055c091c0dc9075371770b; length=212; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • GH25962p OS=Drosophila melanogaster GN=Obp49a PE=1 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2R:complement(8577670..8578053,8578115..8578321,8578378..8578425); ID=FBpp0086985; name=Obp49a-PA; parent=FBgn0050052,FBtr0087872; dbxref=FlyBase:FBpp0086985,FlyBase_Annotation_IDs:CG30052-PA,GB_protein:AAF58469.2,REFSEQ:NP_610812,GB_protein:AAF58469,FlyMine:FBpp0086985,modMine:FBpp0086985; MD5=25b4fb9945055c091c0dc9075371770b; length=212; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • GH25962p OS=Drosophila melanogaster GN=Obp49a PE=2 SV=1 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
  • type=protein; loc=2R:complement(join(12690873..12690920,12690610..12690816,12690165..12690548)); ID=FBpp0086985; name=Obp49a-PA; parent=FBgn0050052,FBtr0087872; dbxref=FlyBase:FBpp0086985,FlyBase_Annotation_IDs:CG30052-PA,GB_protein:AAF58469.2,REFSEQ:NP_610812,GB_protein:AAF58469,FlyMine:FBpp0086985,modMine:FBpp0086985; MD5=25b4fb9945055c091c0dc9075371770b; length=212; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:complement(join(12690873..12690920,12690610..12690816,12690165..12690548)); ID=FBpp0086985; name=Obp49a-PA; parent=FBgn0050052,FBtr0087872; dbxref=FlyBase:FBpp0086985,FlyBase_Annotation_IDs:CG30052-PA,GB_protein:AAF58469.2,REFSEQ:NP_610812,GB_protein:AAF58469,FlyMine:FBpp0086985,modMine:FBpp0086985; MD5=25b4fb9945055c091c0dc9075371770b; length=212; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0086985 type=protein; loc=2R:complement(join(12690873..12690920,12690610..12690816,12690165..12690548)); ID=FBpp0086985; name=Obp49a-PA; parent=FBgn0050052,FBtr0087872; dbxref=FlyBase:FBpp0086985,FlyBase_Annotation_IDs:CG30052-PA,GB_protein:AAF58469.2,REFSEQ:NP_610812,GB_protein:AAF58469,FlyMine:FBpp0086985,modMine:FBpp0086985; MD5=25b4fb9945055c091c0dc9075371770b; length=212; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:complement(join(12690873..12690920,12690610..12690816,12690165..12690548)); ID=FBpp0086985; name=Obp49a-PA; parent=FBgn0050052,FBtr0087872; dbxref=FlyBase:FBpp0086985,FlyBase_Annotation_IDs:CG30052-PA,GB_protein:AAF58469.2,REFSEQ:NP_610812,GB_protein:AAF58469,UniProt/TrEMBL:Q7JVM1,FlyMine:FBpp0086985,modMine:FBpp0086985; MD5=25b4fb9945055c091c0dc9075371770b; length=212; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 212 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: sensory perception of chemical stimulus [UNKNOWN]
    transport [IEA]
    Molecular Function: odorant binding [UNKNOWN][IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSKSQLLLL VVGFCLNAAV SADVDCSKRP SFVNPKTCCP MPDFVTAELK QKCIKFDMTP  60
   61 PPPPDGEASG SFESKRRHHH PHPPPCFFSC IFNETGIYQN RKLDEAKLNA YLQEVFEDSS 120
  121 DLQTTATQAF TTCATKVADF EANLPPRPAP SPPPGFPMCP HDAGHLMGCV FRNMMKNCPD 180
  181 SIRNDSQQCT DMKEFFTKCK PPRGPPPSAE DM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..212] FFAS03 1.85 Solution structure of the honey bee general odorant binding protein ASP2 in complex with trimethylsilyl-d4 propionate


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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