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View Structure Prediction Details

Protein: Obp49a-PA
Organism: Drosophila melanogaster
Length: 212 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Obp49a-PA.

Description E-value Query
Range
Subject
Range
gi|125809887, gi... - gi|54636447|gb|EAL25850.1| GA15609-PA [Drosophila pseudoobscura], gi|125809887|ref|XP_001361272.1| G...
172.0 [0..1] [207..1]

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Predicted Domain #1
Region A:
Residues: [1-212]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSKSQLLLL VVGFCLNAAV SADVDCSKRP SFVNPKTCCP MPDFVTAELK QKCIKFDMTP  60
   61 PPPPDGEASG SFESKRRHHH PHPPPCFFSC IFNETGIYQN RKLDEAKLNA YLQEVFEDSS 120
  121 DLQTTATQAF TTCATKVADF EANLPPRPAP SPPPGFPMCP HDAGHLMGCV FRNMMKNCPD 180
  181 SIRNDSQQCT DMKEFFTKCK PPRGPPPSAE DM

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.85
Match: 1tujA
Description: Solution structure of the honey bee general odorant binding protein ASP2 in complex with trimethylsilyl-d4 propionate
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle