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Protein Overview: Or49a-PA

General Information:
Name(s) found: Or49a-PA / FBpp0087029 [FlyBase]
Description(s) found:
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  • gi|28573387|ref|NP_523711.3| odorant receptor 49a [Drosophila melanogaster] [NCBI NR]
  • gi|28380858|gb|AAF58519.3| odorant receptor 49a [Drosophila melanogaster] [NCBI NR]
  • gi|22096370|sp|Q9V6A9.3|OR49A_DROME RecName: Full=Putative odorant receptor 49a [NCBI NR]
  • Odorant receptor 49a OS=Drosophila melanogaster GN=Or49a PE=1 SV=3 [Swiss-Prot]
  • (Q9V6A9) Putative odorant receptor 49a [Swiss-Prot]
  • The gene Odorant receptor 49a is referred to in FlyBase by the symbol Dmel\Or49a (CG13158, FBgn0033727). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:8280988..8282347. It has the cytological map location 49A2. Based on sequence similarity, it is predicted to have molecular function</span>: olfactory receptor activity. There is experimental evidence that it is involved in the biological process</span>: olfactory behavior; detection of chemical stimulus involved in sensory perception of smell. 4 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG13158-PA translation from_gene[CG13158 Or49a FBgn0033727] seq_release:3 mol_weight=46463 cds_boundaries:(2R:7,458,196..7,459,552[+]) aa_length:396 transcript_info:[CG13158-RA seq_release:3] gene_info:[gene symbol:Or49a FBgn0033727 gene_boundaries:(2 [hmr_yeast5_DM3-1_pombe.fasta]
  • CG13158-PA [Drosophila melanogaster]gi|28573387|ref|NP_523711.3| CG13158-PA [Drosophila melanogaster]gi|22096370|sp|Q9V6A9|O49A_DROME Putative odorant receptor 49a [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:join(8280988..8281763,8281821..8282022,8282077..8282232,8282291..8282347); ID=FBpp0087029; name=Or49a-PA; parent=FBgn0033727,FBtr0087918; dbxref=FlyBase:FBpp0087029,FlyBase_Annotation_IDs:CG13158-PA,GB_protein:AAF58519.3,REFSEQ:NP_523 [fly-100309-contam.fasta]
  • Odorant receptor 49a CG13158-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG13158-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Putative odorant receptor 49a [nr-271106-contam.fasta]
  • type=protein; loc=2R:join(8280988..8281763,8281821..8282022,8282077..8282232,8282291..8282347); ID=FBpp0087029; name=Or49a-PA; parent=FBgn0033727,FBtr0087918; dbxref=FlyBase:FBpp0087029,FlyBase_Annotation_IDs:CG13158-PA,GB_protein:AAF58519.3,REFSEQ:NP_523711,GB_protein:AAF58519; MD5=d892daf10140644cc9cb5b1d8ad1d9d1; length=396; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:join(8280988..8281763,8281821..8282022,8282077..8282232,8282291..8282347); ID=FBpp0087029; name=Or49a-PA; parent=FBgn0033727,FBtr0087918; dbxref=FlyBase:FBpp0087029,FlyBase_Annotation_IDs:CG13158-PA,GB_protein:AAF58519.3,REFSEQ:NP_523711,GB_protein:AAF58519; MD5=d892daf10140644cc9cb5b1d8ad1d9d1; length=396; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Putative odorant receptor 49a OS=Drosophila melanogaster GN=Or49a PE=1 SV=3 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2R:join(8280988..8281763,8281821..8282022,8282077..8282232,8282291..8282347); ID=FBpp0087029; name=Or49a-PA; parent=FBgn0033727,FBtr0087918; dbxref=FlyBase:FBpp0087029,FlyBase_Annotation_IDs:CG13158-PA,GB_protein:AAF58519.3,REFSEQ:NP_523711,GB_protein:AAF58519,FlyMine:FBpp0087029,modMine:FBpp0087029; MD5=d892daf10140644cc9cb5b1d8ad1d9d1; length=396; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:join(12393483..12394258,12394316..12394517,12394572..12394727,12394786..12394842); ID=FBpp0087029; name=Or49a-PA; parent=FBgn0033727,FBtr0087918; dbxref=FlyBase:FBpp0087029,FlyBase_Annotation_IDs:CG13158-PA,GB_protein:AAF58519.3,REFSEQ:NP_523711,GB_protein:AAF58519,FlyMine:FBpp0087029,modMine:FBpp0087029; MD5=d892daf10140644cc9cb5b1d8ad1d9d1; length=396; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:join(12393483..12394258,12394316..12394517,12394572..12394727,12394786..12394842); ID=FBpp0087029; name=Or49a-PA; parent=FBgn0033727,FBtr0087918; dbxref=FlyBase:FBpp0087029,FlyBase_Annotation_IDs:CG13158-PA,GB_protein:AAF58519.3,REFSEQ:NP_523711,GB_protein:AAF58519,FlyMine:FBpp0087029,modMine:FBpp0087029; MD5=d892daf10140644cc9cb5b1d8ad1d9d1; length=396; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0087029 type=protein; loc=2R:join(12393483..12394258,12394316..12394517,12394572..12394727,12394786..12394842); ID=FBpp0087029; name=Or49a-PA; parent=FBgn0033727,FBtr0087918; dbxref=FlyBase:FBpp0087029,FlyBase_Annotation_IDs:CG13158-PA,GB_protein:AAF58519.3,REFSEQ:NP_523711,GB_protein:AAF58519,FlyMine:FBpp0087029,modMine:FBpp0087029; MD5=d892daf10140644cc9cb5b1d8ad1d9d1; length=396; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:join(12393483..12394258,12394316..12394517,12394572..12394727,12394786..12394842); ID=FBpp0087029; name=Or49a-PA; parent=FBgn0033727,FBtr0087918; dbxref=FlyBase:FBpp0087029,FlyBase_Annotation_IDs:CG13158-PA,GB_protein:AAF58519.3,REFSEQ:NP_523711,GB_protein:AAF58519,UniProt/Swiss-Prot:Q9V6A9,FlyMine:FBpp0087029,modMine:FBpp0087029; MD5=d892daf10140644cc9cb5b1d8ad1d9d1; length=396; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 396 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA]
    integral to membrane [ISS]
    Biological Process: sensory perception of smell [ISS]
    detection of chemical stimulus involved in sensory perception of smell [IMP]
    olfactory behavior [IMP]
    Molecular Function: odorant binding [IEA]
    olfactory receptor activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKLRSYEDF IFMANMMFKT LGYDLFHTPK PWWRYLLVRG YFVLCTISNF YEASMVTTRI  60
   61 IEWESLAGSP SKIMRQGLHF FYMLSSQLKF ITFMINRKRL LQLSHRLKEL YPHKEQNQRK 120
  121 YEVNKYYLSC STRNVLYVYY FVMVVMALEP LVQSCIMYLI GFGKADFTYK RIFPTRLTFD 180
  181 SEKPLGYVLA YVIDFTYSQF IVNVSLGTDL WMMCVSSQIS MHLGYLANML ASIRPSPETE 240
  241 QQDCDFLASI IKRHQLMIRL QKDVNYVFGL LLASNLFTTS CLLCCMAYYT VVEGFNWEGI 300
  301 SYMMLFASVA AQFYVVSSHG QMLIDLSTNL AKAAFESKWY EGSLRYKKEI LILMAQAQRP 360
  361 LEISARGVII ISLDTFKILM TITYRFFAVI RQTVEK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..160] MSA 1.315996 View MSA. No confident structure predictions are available.
    2 View Details [161..237] deduced N/A No confident structure predictions are available.
    3 View Details [238..396] MSA 7.353996 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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