YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: Sr-CII-PA, FBpp0...

General Information:
Name(s) found: FBpp0292156 [FlyBase]
Sr-CII-PA / FBpp0087112 [FlyBase]
Description(s) found:
SHOW ONLY BEST
  • gi|7303496|gb|AAF58551.1| scavenger receptor class C, type II [Drosophila melanogaster] [NCBI NR]
  • gi|24652926|ref|NP_524720.2| scavenger receptor class C, type II [Drosophila melanogaster] [NCBI NR]
  • type=protein; loc=2R:complement(8096541..8096896,8096968..8097653,8097765..8098302,8098429..8098648); ID=FBpp0292156; name=Sr-CII-PB; parent=FBgn0020377,FBtr0303037; dbxref=FlyBase:FBpp0292156,FlyBase_Annotation_IDs:CG8856-PB,REFSEQ:NP_001188908,GB_protein:ADV37155; MD5=f1243988e9cdde7804a9c9f2450905f9; length=599; release=r5.56; species=Dmel; [FlyBase]
  • The gene Scavenger receptor class C, type II is referred to in FlyBase by the symbol Dmel\Sr-CII (CG8856, FBgn0020377). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:8096359..8098730. It has the cytological map location 48E10. Based on sequence similarity, it is predicted to have molecular function</span>: scavenger receptor activity. It is reported to be involved in the biological process</span>: defense response. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG8856-PA translation from_gene[CG8856 Sr-CII FBgn0020377] seq_release:3 mol_weight=67147 cds_boundaries:(2R:7,273,752..7,275,856[-]) aa_length:599 transcript_info:[CG8856-RA seq_release:3] gene_info:[gene symbol:Sr-CII FBgn0020377 gene_boundaries:(2R [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9V680) CG8856 protein [DrosMelano7227.FASTAC.txt]
  • (AE003823) Sr-CII gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG8856-PA [Drosophila melanogaster]gi|24652926|ref|NP_524720.2| CG8856-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:complement(8096541..8096896,8096968..8097653,8097765..8098302,8098429..8098648); ID=FBpp0087112; name=Sr-CII-PA; parent=FBgn0020377,FBtr0088004; dbxref=FlyBase:FBpp0087112,FlyBase_Annotation_IDs:CG8856-PA,GB_protein:AAF58551.1,REFSEQ: [fly-100309-contam.fasta]
  • CG8856-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Scavenger receptor class C, type II CG8856-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2R:complement(8096541..8096896,8096968..8097653,8097765..8098302,8098429..8098648); ID=FBpp0087112; name=Sr-CII-PA; parent=FBgn0020377,FBtr0088004; dbxref=FlyBase:FBpp0087112,FlyBase_Annotation_IDs:CG8856-PA,GB_protein:AAF58551.1,REFSEQ:NP_524720,GB_protein:AAF58551; MD5=f1243988e9cdde7804a9c9f2450905f9; length=599; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:complement(8096541..8096896,8096968..8097653,8097765..8098302,8098429..8098648); ID=FBpp0087112; name=Sr-CII-PA; parent=FBgn0020377,FBtr0088004; dbxref=FlyBase:FBpp0087112,FlyBase_Annotation_IDs:CG8856-PA,GB_protein:AAF58551.1,REFSEQ:NP_524720,GB_protein:AAF58551; MD5=f1243988e9cdde7804a9c9f2450905f9; length=599; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Scavenger receptor class C, type II OS=Drosophila melanogaster GN=Sr-CII PE=4 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2R:complement(8096541..8096896,8096968..8097653,8097765..8098302,8098429..8098648); ID=FBpp0087112; name=Sr-CII-PA; parent=FBgn0020377,FBtr0088004; dbxref=FlyBase:FBpp0087112,FlyBase_Annotation_IDs:CG8856-PA,GB_protein:AAF58551.1,REFSEQ:NP_524720,GB_protein:AAF58551,FlyMine:FBpp0087112,modMine:FBpp0087112; MD5=f1243988e9cdde7804a9c9f2450905f9; length=599; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:complement(8096541..8096896,8096968..8097653,8097765..8098302,8098429..8098648); ID=FBpp0292156; name=Sr-CII-PB; parent=FBgn0020377,FBtr0303037; dbxref=FlyBase:FBpp0292156,FlyBase_Annotation_IDs:CG8856-PB,REFSEQ:NP_001188908,GB_protein:ADV37155; MD5=f1243988e9cdde7804a9c9f2450905f9; length=599; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:complement(join(12210924..12211143,12210260..12210797,12209463..12210148,12209036..12209391)); ID=FBpp0087112; name=Sr-CII-PA; parent=FBgn0020377,FBtr0088004; dbxref=FlyBase:FBpp0087112,FlyBase_Annotation_IDs:CG8856-PA,GB_protein:AAF58551.1,REFSEQ:NP_524720,GB_protein:AAF58551,FlyMine:FBpp0087112,modMine:FBpp0087112; MD5=f1243988e9cdde7804a9c9f2450905f9; length=599; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:complement(join(12210924..12211143,12210260..12210797,12209463..12210148,12209036..12209391)); ID=FBpp0292156; name=Sr-CII-PB; parent=FBgn0020377,FBtr0303037; dbxref=FlyBase:FBpp0292156,FlyBase_Annotation_IDs:CG8856-PB,REFSEQ:NP_001188908,GB_protein:ADV37155; MD5=f1243988e9cdde7804a9c9f2450905f9; length=599; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:complement(join(12210924..12211143,12210260..12210797,12209463..12210148,12209036..12209391)); ID=FBpp0087112; name=Sr-CII-PA; parent=FBgn0020377,FBtr0088004; dbxref=FlyBase:FBpp0087112,FlyBase_Annotation_IDs:CG8856-PA,GB_protein:AAF58551.1,REFSEQ:NP_524720,GB_protein:AAF58551,FlyMine:FBpp0087112,modMine:FBpp0087112; MD5=f1243988e9cdde7804a9c9f2450905f9; length=599; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=2R:complement(join(12210924..12211143,12210260..12210797,12209463..12210148,12209036..12209391)); ID=FBpp0292156; name=Sr-CII-PB; parent=FBgn0020377,FBtr0303037; dbxref=FlyBase:FBpp0292156,FlyBase_Annotation_IDs:CG8856-PB,REFSEQ:NP_001188908,GB_protein:ADV37155; MD5=f1243988e9cdde7804a9c9f2450905f9; length=599; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Scavenger receptor class C, type II, isoform A OS=Drosophila melanogaster GN=Sr-CII PE=4 SV=1 [DROME.fasta.20160308]
  • FBpp0087112 type=protein; loc=2R:complement(join(12210924..12211143,12210260..12210797,12209463..12210148,12209036..12209391)); ID=FBpp0087112; name=Sr-CII-PA; parent=FBgn0020377,FBtr0088004; dbxref=FlyBase:FBpp0087112,FlyBase_Annotation_IDs:CG8856-PA,GB_protein:AAF58551.1,REFSEQ:NP_524720,GB_protein:AAF58551,FlyMine:FBpp0087112,modMine:FBpp0087112; MD5=f1243988e9cdde7804a9c9f2450905f9; length=599; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0292156 type=protein; loc=2R:complement(join(12210924..12211143,12210260..12210797,12209463..12210148,12209036..12209391)); ID=FBpp0292156; name=Sr-CII-PB; parent=FBgn0020377,FBtr0303037; dbxref=FlyBase:FBpp0292156,FlyBase_Annotation_IDs:CG8856-PB,REFSEQ:NP_001188908,GB_protein:ADV37155; MD5=f1243988e9cdde7804a9c9f2450905f9; length=599; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:complement(join(12210924..12211143,12210260..12210797,12209463..12210148,12209036..12209391)); ID=FBpp0087112; name=Sr-CII-PA; parent=FBgn0020377,FBtr0088004; dbxref=FlyBase:FBpp0087112,FlyBase_Annotation_IDs:CG8856-PA,GB_protein:AAF58551.1,REFSEQ:NP_524720,GB_protein:AAF58551,UniProt/TrEMBL:A1Z8V0,FlyMine:FBpp0087112,modMine:FBpp0087112; MD5=f1243988e9cdde7804a9c9f2450905f9; length=599; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=2R:complement(join(12210924..12211143,12210260..12210797,12209463..12210148,12209036..12209391)); ID=FBpp0292156; name=Sr-CII-PB; parent=FBgn0020377,FBtr0303037; dbxref=FlyBase:FBpp0292156,FlyBase_Annotation_IDs:CG8856-PB,REFSEQ:NP_001188908,GB_protein:ADV37155,UniProt/TrEMBL:A1Z8V0; MD5=f1243988e9cdde7804a9c9f2450905f9; length=599; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 599 amino acids

    Gene Ontology:
    Cellular Component: integral to plasma membrane [NAS]
    membrane [IEA]
    Biological Process: immune response [IEA]
    defense response [NAS]
    Molecular Function: scavenger receptor activity [IEA][ISS][NAS]
    polysaccharide binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQFFLALTLI LAYSLDTANG SCEGSLDLEN GRFFTRSNNL VIFQCNRGFV LQGNSIHTCD  60
   61 RDGRLREKKP FCARKGCDKP EDPTNGYVLD NPVKAEIVCL DGFVLYGSRT AFCDGEKWST 120
  121 QLGACRRSNH TMDHSCDFES EDQCGWSAEE TIWLPWKRIS AVTDFHHPRT GPRYDHTFGN 180
  181 TSGGHYMRME TQIEAYGSYH FVSPVYPRSL CLNVACCFRF HYFMFGAGVD RLVLSVKPAS 240
  241 LQIDDMWNSF RSNSSKFEIT GSQGTHWLEN TITIDKMHED FQVVFTATDA RSQFGDIAID 300
  301 DVKLMTGSEC GVDGYSTTTT TESASSAMSS SEEPLVFDMM SCTFRCGSIS PGSPLFSDEG 360
  361 IVMSCGCDDS CILNNNCCPN YFEKCVKELD IGSNVFLNSA NTTTTSISRN TTTEKVFSIS 420
  421 LEASRSFTTP RTSTNSTTFP RTQISTKKLL NTHETLTETS TIPTRNKKLS QPSIFSSQHI 480
  481 TVTTTTDRSR KDYHEDIAGQ LDMNTNIPHP ALIVMYLLIG VILVIVVANL KQLCKILSKN 540
  541 SSRDNEKVVS FKKAFEGLRK PRRLSQNCNG MDQHLCSAFD EDLDYFEDMD MNIRMVTDL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..454] PSI-BLAST 36.522879 No description for 2q7zA was found.
    2 View Details [455..599] MSA 1.087981 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle