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Protein Overview: Sr-CII-PA, FBpp0...

General Information:
Name(s) found: FBpp0292156 [FlyBase]
Sr-CII-PA / FBpp0087112 [FlyBase]
Description(s) found:
Found 26 descriptions.
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  • type=protein; loc=2R:complement(8096541..8096896,8096968..8097653,8097765..8098302,8098429..8098648); ID=FBpp0292156; name=Sr-CII-PB; parent=FBgn0020377,FBtr0303037; dbxref=FlyBase:FBpp0292156,FlyBase_Annotation_IDs:CG8856-PB,REFSEQ:NP_001188908,GB_protein:ADV37155; MD5=f1243988e9cdde7804a9c9f2450905f9; length=599; release=r5.56; species=Dmel; [FlyBase]
  • The gene Scavenger receptor class C, type II is referred to in FlyBase by the symbol Dmel\Sr-CII (CG8856, FBgn0020377). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:8096359..8098730. It has the cytological map location 48E10. Based on sequence similarity, it is predicted to have molecular function</span>: scavenger receptor activity. It is reported to be involved in the biological process</span>: defense response. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 599 amino acids

    Gene Ontology:
    Cellular Component: integral to plasma membrane [NAS]
    membrane [IEA]
    Biological Process: immune response [IEA]
    defense response [NAS]
    Molecular Function: scavenger receptor activity [IEA][ISS][NAS]
    polysaccharide binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQFFLALTLI LAYSLDTANG SCEGSLDLEN GRFFTRSNNL VIFQCNRGFV LQGNSIHTCD  60
   61 RDGRLREKKP FCARKGCDKP EDPTNGYVLD NPVKAEIVCL DGFVLYGSRT AFCDGEKWST 120
  121 QLGACRRSNH TMDHSCDFES EDQCGWSAEE TIWLPWKRIS AVTDFHHPRT GPRYDHTFGN 180
  181 TSGGHYMRME TQIEAYGSYH FVSPVYPRSL CLNVACCFRF HYFMFGAGVD RLVLSVKPAS 240
  241 LQIDDMWNSF RSNSSKFEIT GSQGTHWLEN TITIDKMHED FQVVFTATDA RSQFGDIAID 300
  301 DVKLMTGSEC GVDGYSTTTT TESASSAMSS SEEPLVFDMM SCTFRCGSIS PGSPLFSDEG 360
  361 IVMSCGCDDS CILNNNCCPN YFEKCVKELD IGSNVFLNSA NTTTTSISRN TTTEKVFSIS 420
  421 LEASRSFTTP RTSTNSTTFP RTQISTKKLL NTHETLTETS TIPTRNKKLS QPSIFSSQHI 480
  481 TVTTTTDRSR KDYHEDIAGQ LDMNTNIPHP ALIVMYLLIG VILVIVVANL KQLCKILSKN 540
  541 SSRDNEKVVS FKKAFEGLRK PRRLSQNCNG MDQHLCSAFD EDLDYFEDMD MNIRMVTDL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..454] PSI-BLAST 36.522879 No description for 2q7zA was found.
    2 View Details [455..599] MSA 1.087981 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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