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Protein Overview: Or47a-PA

General Information:
Name(s) found: Or47a-PA / FBpp0087212 [FlyBase]
Description(s) found:
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  • gi|7303643|gb|AAF58695.1| odorant receptor 47a [Drosophila melanogaster] [NCBI NR]
  • gi|5059427|gb|AAD39006.1|AF156880_1 odorant receptor DOR24 [Drosophila melanogaster] [NCBI NR]
  • gi|17737459|ref|NP_523689.1| odorant receptor 47a [Drosophila melanogaster] [NCBI NR]
  • gi|12643694|sp|P81921.1|OR47A_DROME RecName: Full=Odorant receptor 47a [NCBI NR]
  • Odorant receptor 47a OS=Drosophila melanogaster GN=Or47a PE=1 SV=1 [Swiss-Prot]
  • (P81921) Odorant receptor 47a [Swiss-Prot]
  • The gene Odorant receptor 47a is referred to in FlyBase by the symbol Dmel\Or47a (CG13225, FBgn0026386). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:7137873..7139420. It has the cytological map location 47E1-47E3. There is experimental evidence that it has the molecular function</span>: olfactory receptor activity. Based on sequence similarity, it is predicted to be involved in the biological process</span>: sensory perception of smell. 4 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG13225-PA translation from_gene[CG13225 Or47a FBgn0026386] seq_release:3 mol_weight=43966 cds_boundaries:(2R:6,315,107..6,316,448[+]) aa_length:385 transcript_info:[CG13225-RA seq_release:3] gene_info:[gene symbol:Or47a FBgn0026386 gene_boundaries:(2 [hmr_yeast5_DM3-1_pombe.fasta]
  • (AE003826) Or47a gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG13225-PA [Drosophila melanogaster]gi|17737459|ref|NP_523689.1| CG13225-PA [Drosophila melanogaster]gi|5059427|gb|AAD39006.1| odorant receptor DOR24 [Drosophila melanogaster]gi|12643694|sp|P81921|O47A_DROME Odorant receptor 47a [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:join(7137883..7138183,7138240..7138429,7138490..7139105,7139177..7139227); ID=FBpp0087212; name=Or47a-PA; parent=FBgn0026386,FBtr0088111; dbxref=FlyBase:FBpp0087212,FlyBase_Annotation_IDs:CG13225-PA,GB_protein:AAF58695.1,REFSEQ:NP_523 [fly-100309-contam.fasta]
  • Odorant receptor 47a CG13225-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG13225-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Odorant receptor 47a [nr-271106-contam.fasta]
  • odorant receptor DOR24 [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2R:join(7137883..7138183,7138240..7138429,7138490..7139105,7139177..7139227); ID=FBpp0087212; name=Or47a-PA; parent=FBgn0026386,FBtr0088111; dbxref=FlyBase:FBpp0087212,FlyBase_Annotation_IDs:CG13225-PA,GB_protein:AAF58695.1,REFSEQ:NP_523689,GB_protein:AAF58695; MD5=5cdad15879380e0af06bb003d44b59de; length=385; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:join(7137883..7138183,7138240..7138429,7138490..7139105,7139177..7139227); ID=FBpp0087212; name=Or47a-PA; parent=FBgn0026386,FBtr0088111; dbxref=FlyBase:FBpp0087212,FlyBase_Annotation_IDs:CG13225-PA,GB_protein:AAF58695.1,REFSEQ:NP_523689,GB_protein:AAF58695; MD5=5cdad15879380e0af06bb003d44b59de; length=385; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • type=protein; loc=2R:join(7137883..7138183,7138240..7138429,7138490..7139105,7139177..7139227); ID=FBpp0087212; name=Or47a-PA; parent=FBgn0026386,FBtr0088111; dbxref=FlyBase:FBpp0087212,FlyBase_Annotation_IDs:CG13225-PA,GB_protein:AAF58695.1,REFSEQ:NP_523689,GB_protein:AAF58695,FlyMine:FBpp0087212,modMine:FBpp0087212; MD5=5cdad15879380e0af06bb003d44b59de; length=385; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:join(11250378..11250678,11250735..11250924,11250985..11251600,11251672..11251722); ID=FBpp0087212; name=Or47a-PA; parent=FBgn0026386,FBtr0088111; dbxref=FlyBase:FBpp0087212,FlyBase_Annotation_IDs:CG13225-PA,GB_protein:AAF58695.1,REFSEQ:NP_523689,GB_protein:AAF58695,FlyMine:FBpp0087212,modMine:FBpp0087212; MD5=5cdad15879380e0af06bb003d44b59de; length=385; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:join(11250378..11250678,11250735..11250924,11250985..11251600,11251672..11251722); ID=FBpp0087212; name=Or47a-PA; parent=FBgn0026386,FBtr0088111; dbxref=FlyBase:FBpp0087212,FlyBase_Annotation_IDs:CG13225-PA,GB_protein:AAF58695.1,REFSEQ:NP_523689,GB_protein:AAF58695,FlyMine:FBpp0087212,modMine:FBpp0087212; MD5=5cdad15879380e0af06bb003d44b59de; length=385; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0087212 type=protein; loc=2R:join(11250378..11250678,11250735..11250924,11250985..11251600,11251672..11251722); ID=FBpp0087212; name=Or47a-PA; parent=FBgn0026386,FBtr0088111; dbxref=FlyBase:FBpp0087212,FlyBase_Annotation_IDs:CG13225-PA,GB_protein:AAF58695.1,REFSEQ:NP_523689,GB_protein:AAF58695,FlyMine:FBpp0087212,modMine:FBpp0087212; MD5=5cdad15879380e0af06bb003d44b59de; length=385; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:join(11250378..11250678,11250735..11250924,11250985..11251600,11251672..11251722); ID=FBpp0087212; name=Or47a-PA; parent=FBgn0026386,FBtr0088111; dbxref=FlyBase:FBpp0087212,FlyBase_Annotation_IDs:CG13225-PA,GB_protein:AAF58695.1,REFSEQ:NP_523689,GB_protein:AAF58695,UniProt/Swiss-Prot:P81921,FlyMine:FBpp0087212,modMine:FBpp0087212; MD5=5cdad15879380e0af06bb003d44b59de; length=385; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 385 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA]
    integral to membrane [ISS]
    Biological Process: sensory perception of smell [IEA][ISS]
    Molecular Function: odorant binding [IEA]
    olfactory receptor activity [IDA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSFLQVQKS TIALLGFDLF SENREMWKRP YRAMNVFSIA AIFPFILAAV LHNWKNVLLL  60
   61 ADAMVALLIT ILGLFKFSMI LYLRRDFKRL IDKFRLLMSN EAEQGEEYAE ILNAANKQDQ 120
  121 RMCTLFRTCF LLAWALNSVL PLVRMGLSYW LAGHAEPELP FPCLFPWNIH IIRNYVLSFI 180
  181 WSAFASTGVV LPAVSLDTIF CSFTSNLCAF FKIAQYKVVR FKGGSLKESQ ATLNKVFALY 240
  241 QTSLDMCNDL NQCYQPIICA QFFISSLQLC MLGYLFSITF AQTEGVYYAS FIATIIIQAY 300
  301 IYCYCGENLK TESASFEWAI YDSPWHESLG AGGASTSICR SLLISMMRAH RGFRITGYFF 360
  361 EANMEAFSSI VRTAMSYITM LRSFS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..191] MSA 2.307993 View MSA. No confident structure predictions are available.
    2 View Details [192..385] MSA 9.311993 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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