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Protein Overview: CG12309-PA

General Information:
Name(s) found: CG12309-PA / FBpp0087310 [FlyBase]
Description(s) found:
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  • gi|28573346|ref|NP_610602.2| CG12309 [Drosophila melanogaster] [NCBI NR]
  • gi|28380886|gb|AAF58761.2| CG12309 [Drosophila melanogaster] [NCBI NR]
  • gi|21430430|gb|AAM50893.1| LP05719p [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG12309 (CG12309, FBgn0033542). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:6612775..6614783. It has the cytological map location 47B7. Based on sequence similarity, it is predicted to have molecular function</span>: carbonate dehydratase activity. The biological processes in which it is involved are not known. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG12309-PA translation from_gene[CG12309 CG12309 FBgn0033542] seq_release:3 mol_weight=59156 cds_boundaries:(2R:5,790,205..5,791,785[+]) aa_length:527 transcript_info:[CG12309-RA seq_release:3] gene_info:[gene symbol:CG12309 FBgn0033542 gene_boundarie [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q8MS78) LP05719p (CG12309-PA) [DrosMelano7227.FASTAC.txt]
  • CG12309-PA [Drosophila melanogaster]gi|21430430|gb|AAM50893.1| LP05719p [Drosophila melanogaster]gi|28573346|ref|NP_610602.2| CG12309-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:6612981..6614564; ID=FBpp0087310; name=CG12309-PA; parent=FBgn0033542,FBtr0088215; dbxref=GB_protein:AAF58761.2,FlyBase:FBpp0087310,FlyBase_Annotation_IDs:CG12309-PA,REFSEQ:NP_610602,GB_protein:AAF58761; MD5=c59e183bd0e0d89ab8c8729b33 [fly-100309-contam.fasta]
  • LP05719p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG12309-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2R:6612981..6614564; ID=FBpp0087310; name=CG12309-PA; parent=FBgn0033542,FBtr0088215; dbxref=GB_protein:AAF58761.2,FlyBase:FBpp0087310,FlyBase_Annotation_IDs:CG12309-PA,REFSEQ:NP_610602,GB_protein:AAF58761; MD5=c59e183bd0e0d89ab8c8729b33743459; length=527; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:6612981..6614564; ID=FBpp0087310; name=CG12309-PA; parent=FBgn0033542,FBtr0088215; dbxref=GB_protein:AAF58761.2,FlyBase:FBpp0087310,FlyBase_Annotation_IDs:CG12309-PA,REFSEQ:NP_610602,GB_protein:AAF58761; MD5=c59e183bd0e0d89ab8c8729b33743459; length=527; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG12309 OS=Drosophila melanogaster GN=CG12309 PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2R:6612981..6614564; ID=FBpp0087310; name=CG12309-PA; parent=FBgn0033542,FBtr0088215; dbxref=GB_protein:AAF58761.2,FlyBase:FBpp0087310,FlyBase_Annotation_IDs:CG12309-PA,REFSEQ:NP_610602,GB_protein:AAF58761,FlyMine:FBpp0087310,modMine:FBpp0087310; MD5=c59e183bd0e0d89ab8c8729b33743459; length=527; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:10725476..10727059; ID=FBpp0087310; name=CG12309-PA; parent=FBgn0033542,FBtr0088215; dbxref=GB_protein:AAF58761.2,FlyBase:FBpp0087310,FlyBase_Annotation_IDs:CG12309-PA,REFSEQ:NP_610602,GB_protein:AAF58761,FlyMine:FBpp0087310,modMine:FBpp0087310; MD5=c59e183bd0e0d89ab8c8729b33743459; length=527; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:10725476..10727059; ID=FBpp0087310; name=CG12309-PA; parent=FBgn0033542,FBtr0088215; dbxref=GB_protein:AAF58761.2,FlyBase:FBpp0087310,FlyBase_Annotation_IDs:CG12309-PA,REFSEQ:NP_610602,GB_protein:AAF58761,FlyMine:FBpp0087310,modMine:FBpp0087310; MD5=c59e183bd0e0d89ab8c8729b33743459; length=527; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0087310 type=protein; loc=2R:10725476..10727059; ID=FBpp0087310; name=CG12309-PA; parent=FBgn0033542,FBtr0088215; dbxref=GB_protein:AAF58761.2,FlyBase:FBpp0087310,FlyBase_Annotation_IDs:CG12309-PA,REFSEQ:NP_610602,GB_protein:AAF58761,FlyMine:FBpp0087310,modMine:FBpp0087310; MD5=c59e183bd0e0d89ab8c8729b33743459; length=527; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:10725476..10727059; ID=FBpp0087310; name=CG12309-PA; parent=FBgn0033542,FBtr0088215; dbxref=GB_protein:AAF58761.2,FlyBase:FBpp0087310,FlyBase_Annotation_IDs:CG12309-PA,REFSEQ:NP_610602,GB_protein:AAF58761,UniProt/TrEMBL:Q8MS78,FlyMine:FBpp0087310,modMine:FBpp0087310; MD5=c59e183bd0e0d89ab8c8729b33743459; length=527; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 527 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: carbonate dehydratase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFDTALGTVL SVMVQLIILV FGQILGQVVQ HPLITTGLCL LGAFAYHADQ ETLKEIYQRV  60
   61 LLLIRTPLQF GNTSCSRNSA PVYGYDMQHG PHTWLPKSRS SSSSVEEATF FQSPVNIDES 120
  121 QIQRMAIREL LSWNHYDDLP ASITLENTGQ TLILRAQFHG NAPTISGADL LASYTFLELR 180
  181 FHWGWCNSEG SEHTINHRKF PLEMQVMHKT GSGIPRTCTS SYDLLMIGYV FELSAHNPFL 240
  241 DPLVQNLRLV QKPGKRVQIS PFPISYLMYQ FRSGFYSYGG SLTHPPCYQG TEWFIFPESL 300
  301 AISDFQLRHF RLLLGPDGIS PIARNSRPVQ HMGNRVVSLN CFCPYDAAQL SRMHVELCQA 360
  361 QAQEEHEEER IEQEQQLELE RELERQRESD LKAQQEQASE AAIAASEDEG QLIETIDTTT 420
  421 IITSSSNTSI CMTTLMRKDS PRQLEQPSQM PMMAPNQGNF CNPGIVIFSG VNESKSKCGI 480
  481 HQDTPEELMI HNRGTGRNMG VQNGCKADAF CGVGDGVNIG IRMELVE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..345] PSI-BLAST 85.39794 No description for 2fnkA was found.
    2 View Details [346..424] MSA 1.088987 View MSA. No confident structure predictions are available.
    3 View Details [425..527] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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