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Protein Overview: Obp46a-PA

General Information:
Name(s) found: Obp46a-PA / FBpp0087448 [FlyBase]
Description(s) found:
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  • gi|24652406|ref|NP_610574.1| Odorant-binding protein 46a [Drosophila melanogaster] [NCBI NR]
  • gi|21627584|gb|AAF58810.2| Odorant-binding protein 46a [Drosophila melanogaster] [NCBI NR]
  • The gene Odorant-binding protein 46a is referred to in FlyBase by the symbol Dmel\Obp46a (CG12905, FBgn0033508). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:6198677..6199528. It has the cytological map location 47A1. Based on sequence similarity, it is predicted to have molecular function</span>: odorant binding. Based on sequence similarity, it is predicted to be involved in the biological process</span>: sensory perception of chemical stimulus. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG12905-PA translation from_gene[CG12905 Obp46a FBgn0033508] seq_release:3 mol_weight=23031 cds_boundaries:(2R:5,371,808..5,372,656[-]) aa_length:198 transcript_info:[CG12905-RA seq_release:3] gene_info:[gene symbol:Obp46a FBgn0033508 gene_boundaries: [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9V5J6) CG12905 protein [DrosMelano7227.FASTAC.txt]
  • CG12905-PA [Drosophila melanogaster]gi|24652406|ref|NP_610574.1| CG12905-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:complement(6198677..6198888,6198947..6199103,6199155..6199268,6199415..6199528); ID=FBpp0087448; name=Obp46a-PA; parent=FBgn0033508,FBtr0088359; dbxref=FlyBase:FBpp0087448,FlyBase_Annotation_IDs:CG12905-PA,GB_protein:AAF58810.2,REFSEQ [fly-100309-contam.fasta]
  • Odorant-binding protein 46a CG12905-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG12905-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2R:complement(6198677..6198888,6198947..6199103,6199155..6199268,6199415..6199528); ID=FBpp0087448; name=Obp46a-PA; parent=FBgn0033508,FBtr0088359; dbxref=FlyBase:FBpp0087448,FlyBase_Annotation_IDs:CG12905-PA,GB_protein:AAF58810.2,REFSEQ:NP_610574,GB_protein:AAF58810; MD5=0146880d17de43b2f86cf925b3f21f5a; length=198; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:complement(6198677..6198888,6198947..6199103,6199155..6199268,6199415..6199528); ID=FBpp0087448; name=Obp46a-PA; parent=FBgn0033508,FBtr0088359; dbxref=FlyBase:FBpp0087448,FlyBase_Annotation_IDs:CG12905-PA,GB_protein:AAF58810.2,REFSEQ:NP_610574,GB_protein:AAF58810; MD5=0146880d17de43b2f86cf925b3f21f5a; length=198; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Odorant-binding protein 46a OS=Drosophila melanogaster GN=Obp46a PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2R:complement(6198677..6198888,6198947..6199103,6199155..6199268,6199415..6199528); ID=FBpp0087448; name=Obp46a-PA; parent=FBgn0033508,FBtr0088359; dbxref=FlyBase:FBpp0087448,FlyBase_Annotation_IDs:CG12905-PA,GB_protein:AAF58810.2,REFSEQ:NP_610574,GB_protein:AAF58810,FlyMine:FBpp0087448,modMine:FBpp0087448; MD5=0146880d17de43b2f86cf925b3f21f5a; length=198; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:complement(join(10311910..10312023,10311650..10311763,10311442..10311598,10311172..10311383)); ID=FBpp0087448; name=Obp46a-PA; parent=FBgn0033508,FBtr0088359; dbxref=FlyBase:FBpp0087448,FlyBase_Annotation_IDs:CG12905-PA,GB_protein:AAF58810.2,REFSEQ:NP_610574,GB_protein:AAF58810,FlyMine:FBpp0087448,modMine:FBpp0087448; MD5=0146880d17de43b2f86cf925b3f21f5a; length=198; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:complement(join(10311910..10312023,10311650..10311763,10311442..10311598,10311172..10311383)); ID=FBpp0087448; name=Obp46a-PA; parent=FBgn0033508,FBtr0088359; dbxref=FlyBase:FBpp0087448,FlyBase_Annotation_IDs:CG12905-PA,GB_protein:AAF58810.2,REFSEQ:NP_610574,GB_protein:AAF58810,FlyMine:FBpp0087448,modMine:FBpp0087448; MD5=0146880d17de43b2f86cf925b3f21f5a; length=198; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0087448 type=protein; loc=2R:complement(join(10311910..10312023,10311650..10311763,10311442..10311598,10311172..10311383)); ID=FBpp0087448; name=Obp46a-PA; parent=FBgn0033508,FBtr0088359; dbxref=FlyBase:FBpp0087448,FlyBase_Annotation_IDs:CG12905-PA,GB_protein:AAF58810.2,REFSEQ:NP_610574,GB_protein:AAF58810,FlyMine:FBpp0087448,modMine:FBpp0087448; MD5=0146880d17de43b2f86cf925b3f21f5a; length=198; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:complement(join(10311910..10312023,10311650..10311763,10311442..10311598,10311172..10311383)); ID=FBpp0087448; name=Obp46a-PA; parent=FBgn0033508,FBtr0088359; dbxref=FlyBase:FBpp0087448,FlyBase_Annotation_IDs:CG12905-PA,GB_protein:AAF58810.2,REFSEQ:NP_610574,GB_protein:AAF58810,UniProt/TrEMBL:A1Z875,FlyMine:FBpp0087448,modMine:FBpp0087448; MD5=0146880d17de43b2f86cf925b3f21f5a; length=198; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 198 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: sensory perception of chemical stimulus [UNKNOWN]
    Molecular Function: odorant binding [UNKNOWN][NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCSQLFAFLL LLLTAFVTGR STPPALDEDC ELNSVDTMHD FCCDLHDESP QFSDCQMEWH  60
   61 EKIPYETDEE EQTYMFCTAE CSFNSTNFLG RDRRSLNLNE VKEHLESDLV NDADIKLLYD 120
  121 TYVKCDKHAL SLMPHKGVKQ LSKRLSRLGC HPYPGLVLEC VANEMILHCP TKRFRQTAQC 180
  181 EETRNHLKQC MQYLKYKS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..198] FFAS03 1.2 No description for 2pqlA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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