YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Obp46a-PA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCSQLFAFLL LLLTAFVTGR STPPALDEDC ELNSVDTMHD FCCDLHDESP QFSDCQMEWH  60
   61 EKIPYETDEE EQTYMFCTAE CSFNSTNFLG RDRRSLNLNE VKEHLESDLV NDADIKLLYD 120
  121 TYVKCDKHAL SLMPHKGVKQ LSKRLSRLGC HPYPGLVLEC VANEMILHCP TKRFRQTAQC 180
  181 EETRNHLKQC MQYLKYKS

Type	Start	End	Confidence
Signal Peptide	1	21	0.96
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	198	0.99