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Protein Overview: Fmrf-PA

General Information:
Name(s) found: Fmrf-PA / FBpp0087471 [FlyBase]
Description(s) found:
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  • gi|7303827|gb|AAF58874.1| FMRFamide-related [Drosophila melanogaster] [NCBI NR]
  • gi|24652254|ref|NP_523669.2| FMRFamide-related [Drosophila melanogaster] [NCBI NR]
  • gi|17944440|gb|AAL48110.1| RH02452p [Drosophila melanogaster] [NCBI NR]
  • The gene FMRFamide-related is referred to in FlyBase by the symbol Dmel\Fmrf (CG2346, FBgn0000715). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:5793796..5797969. It has the cytological map location 46C4. It is reported to have molecular function</span>: hormone activity; neuropeptide hormone activity. There is experimental evidence that it is involved in the biological process</span>: negative regulation of heart contraction. 13 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG2346-PA translation from_gene[CG2346 Fmrf FBgn0000715] seq_release:3 mol_weight=40183 cds_boundaries:(2R:4,969,772..4,970,812[+]) aa_length:347 transcript_info:[CG2346-RA seq_release:3] gene_info:[gene symbol:Fmrf FBgn0000715 gene_boundaries:(2R:4,9 [hmr_yeast5_DM3-1_pombe.fasta]
  • (AE003831) Fmrf gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG2346-PA [Drosophila melanogaster]gi|17944440|gb|AAL48110.1| RH02452p [Drosophila melanogaster]gi|24652254|ref|NP_523669.2| CG2346-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:5796644..5797687; ID=FBpp0087471; name=Fmrf-PA; parent=FBgn0000715,FBtr0088383; dbxref=FlyBase:FBpp0087471,FlyBase_Annotation_IDs:CG2346-PA,GB_protein:AAF58874.1,REFSEQ:NP_523669,GB_protein:AAF58874; MD5=c100e2f13726824b1ad75712a3a1db [fly-100309-contam.fasta]
  • RH02452p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • FMRFamide-related CG2346-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG2346-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2R:5796644..5797687; ID=FBpp0087471; name=Fmrf-PA; parent=FBgn0000715,FBtr0088383; dbxref=FlyBase:FBpp0087471,FlyBase_Annotation_IDs:CG2346-PA,GB_protein:AAF58874.1,REFSEQ:NP_523669,GB_protein:AAF58874; MD5=c100e2f13726824b1ad75712a3a1db74; length=347; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:5796644..5797687; ID=FBpp0087471; name=Fmrf-PA; parent=FBgn0000715,FBtr0088383; dbxref=FlyBase:FBpp0087471,FlyBase_Annotation_IDs:CG2346-PA,GB_protein:AAF58874.1,REFSEQ:NP_523669,GB_protein:AAF58874; MD5=c100e2f13726824b1ad75712a3a1db74; length=347; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • type=protein; loc=2R:5796644..5797687; ID=FBpp0087471; name=Fmrf-PA; parent=FBgn0000715,FBtr0088383; dbxref=FlyBase:FBpp0087471,FlyBase_Annotation_IDs:CG2346-PA,GB_protein:AAF58874.1,REFSEQ:NP_523669,GB_protein:AAF58874,FlyMine:FBpp0087471,modMine:FBpp0087471; MD5=c100e2f13726824b1ad75712a3a1db74; length=347; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:9909139..9910182; ID=FBpp0087471; name=FMRFa-PA; parent=FBgn0000715,FBtr0088383; dbxref=FlyBase:FBpp0087471,FlyBase_Annotation_IDs:CG2346-PA,GB_protein:AAF58874.1,REFSEQ:NP_523669,GB_protein:AAF58874,FlyMine:FBpp0087471,modMine:FBpp0087471; MD5=c100e2f13726824b1ad75712a3a1db74; length=347; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:9909139..9910182; ID=FBpp0087471; name=FMRFa-PA; parent=FBgn0000715,FBtr0088383; dbxref=FlyBase:FBpp0087471,FlyBase_Annotation_IDs:CG2346-PA,GB_protein:AAF58874.1,REFSEQ:NP_523669,GB_protein:AAF58874,FlyMine:FBpp0087471,modMine:FBpp0087471; MD5=c100e2f13726824b1ad75712a3a1db74; length=347; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0087471 type=protein; loc=2R:9909139..9910182; ID=FBpp0087471; name=FMRFa-PA; parent=FBgn0000715,FBtr0088383; dbxref=FlyBase:FBpp0087471,FlyBase_Annotation_IDs:CG2346-PA,GB_protein:AAF58874.1,REFSEQ:NP_523669,GB_protein:AAF58874,FlyMine:FBpp0087471,modMine:FBpp0087471; MD5=c100e2f13726824b1ad75712a3a1db74; length=347; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:9909139..9910182; ID=FBpp0087471; name=FMRFa-PA; parent=FBgn0000715,FBtr0088383; dbxref=FlyBase:FBpp0087471,FlyBase_Annotation_IDs:CG2346-PA,GB_protein:AAF58874.1,REFSEQ:NP_523669,GB_protein:AAF58874,UniProt/Swiss-Prot:P10552,FlyMine:FBpp0087471,modMine:FBpp0087471; MD5=c100e2f13726824b1ad75712a3a1db74; length=347; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 347 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGIALMFLLA LYQMQSAIHS EIIDTPNYAG NSLQDADSEV SPPQDNDLVD ALLGNDQTER  60
   61 AELEFRHPIS VIGIDYSKNA VVLHFQKHGR KPRYKYDPEL EAKRRSVQDN FMHFGKRQAE 120
  121 QLPPEGSYAE SDELEGMAKR AAMDRYGRDP KQDFMRFGRD PKQDFMRFGR DPKQDFMRFG 180
  181 RDPKQDFMRF GRDPKQDFMR FGRTPAEDFM RFGRTPAEDF MRFGRSDNFM RFGRSPHEEL 240
  241 RSPKQDFMRF GRPDNFMRFG RSAPQDFVRS GKMDSNFIRF GKSLKPAAPE SKPVKSNQGN 300
  301 PGERSPVDKA MTELFKKQEL QDQQVKNGAQ ATTTQDGSVE QDQFFGQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..245] MSA 4.041983 View MSA. No confident structure predictions are available.
    2 View Details [246..347] MSA 6.043995 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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