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View Structure Prediction Details

Protein: Fmrf-PA
Organism: Drosophila melanogaster
Length: 347 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Fmrf-PA.

Description E-value Query
Range
Subject
Range
gi|157441 - gi|157441|gb|AAA28537.1| FMRFamide neuropeptide precursor
302.0 [0..1] [347..1]

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Predicted Domain #1
Region A:
Residues: [1-245]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGIALMFLLA LYQMQSAIHS EIIDTPNYAG NSLQDADSEV SPPQDNDLVD ALLGNDQTER  60
   61 AELEFRHPIS VIGIDYSKNA VVLHFQKHGR KPRYKYDPEL EAKRRSVQDN FMHFGKRQAE 120
  121 QLPPEGSYAE SDELEGMAKR AAMDRYGRDP KQDFMRFGRD PKQDFMRFGR DPKQDFMRFG 180
  181 RDPKQDFMRF GRDPKQDFMR FGRTPAEDFM RFGRTPAEDF MRFGRSDNFM RFGRSPHEEL 240
  241 RSPKQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [246-347]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DFMRFGRPDN FMRFGRSAPQ DFVRSGKMDS NFIRFGKSLK PAAPESKPVK SNQGNPGERS  60
   61 PVDKAMTELF KKQELQDQQV KNGAQATTTQ DGSVEQDQFF GQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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