YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: ced-6-PC, ced-6-...

General Information:
Name(s) found: ced-6-PA / FBpp0087633 [FlyBase]
ced-6-PC / FBpp0087632 [FlyBase]
ced-6-PB / FBpp0087631 [FlyBase]
Description(s) found:
SHOW ONLY BEST
  • gi|7303892|gb|AAF58937.1| ced-6, isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|6653275|gb|AAF22653.1|AF204777_1 CED-6 [Drosophila melanogaster] [NCBI NR]
  • gi|24652092|ref|NP_724790.1| ced-6, isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|24652090|ref|NP_724789.1| ced-6, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|21645537|gb|AAM71067.1| ced-6, isoform C [Drosophila melanogaster] [NCBI NR]
  • gi|21429062|gb|AAM50250.1| LD19266p [Drosophila melanogaster] [NCBI NR]
  • gi|19921910|ref|NP_610488.1| ced-6, isoform C [Drosophila melanogaster] [NCBI NR]
  • gi|122129569|sp|Q7JUY7.1|CED6_DROME RecName: Full=PTB domain-containing adapter protein ced-6; AltName: Full=Cell death protein 6 homolog [NCBI NR]
  • gi|10727689|gb|AAG22292.1| ced-6, isoform A [Drosophila melanogaster] [NCBI NR]
  • PTB domain-containing adapter protein ced-6 OS=Drosophila melanogaster GN=ced-6 PE=1 SV=1 [Swiss-Prot]
  • type=protein; loc=2R:complement(5322780..5322839,5322899..5323029,5323091..5323498,5323556..5323797,5323867..5324303,5324925..5325200); ID=FBpp0297721; name=ced-6-PE; parent=FBgn0029092,FBtr0306809; dbxref=FlyBase:FBpp0297721,FlyBase_Annotation_IDs:CG11804-PE; MD5=2dab452a6ea4a21fdf0b6bd163d73ab9; length=517; release=r5.43; species=Dmel; [FlyBase]
  • The gene ced-6 is referred to in FlyBase by the symbol Dmel\ced-6 (CG11804, FBgn0029092). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:5322174..5329065. It has the cytological map location 45D7-45D8. There is experimental evidence that it has the molecular function</span>: protein binding. There is experimental evidence that it is involved in the biological process</span>: mushroom body development. 6 alleles are reported. No phenotypic data is available. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
  • >CG11804-PA translation from_gene[CG11804 ced-6 FBgn0029092] seq_release:3 mol_weight=56141 cds_boundaries:(2R:4,495,910..4,498,327[-]) aa_length:517 transcript_info:[CG11804-RA seq_release:3] gene_info:[gene symbol:ced-6 FBgn0029092 gene_boundaries:(2 [hmr_yeast5_DM3-1_pombe.fasta]
  • >CG11804-PC translation from_gene[CG11804 ced-6 FBgn0029092] seq_release:3 mol_weight=56141 cds_boundaries:(2R:4,495,910..4,498,327[-]) aa_length:517 transcript_info:[CG11804-RC seq_release:3] gene_info:[gene symbol:ced-6 FBgn0029092 gene_boundaries:(2 [hmr_yeast5_DM3-1_pombe.fasta]
  • >CG11804-PB translation from_gene[CG11804 ced-6 FBgn0029092] seq_release:3 mol_weight=56141 cds_boundaries:(2R:4,495,910..4,498,327[-]) aa_length:517 transcript_info:[CG11804-RB seq_release:3] gene_info:[gene symbol:ced-6 FBgn0029092 gene_boundaries:(2 [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9V3H3) CG11804 protein (LD19266p) [DrosMelano7227.FASTAC.txt]
  • (AE003833) ced-6 gene product [alt 2] [Drosophila melanogaster] [yeastflysequest.fasta]
  • (AE003833) ced-6 gene product [alt 1] [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG11804-PC, isoform C [Drosophila melanogaster]gi|7303892|gb|AAF58937.1| CG11804-PB, isoform B [Drosophila melanogaster]gi|10727689|gb|AAG22292.1| CG11804-PA, isoform A [Drosophila melanogaster]gi|21429062|gb|AAM50250.1| LD19266p [Drosophila melanogast [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:complement(5322780..5322839,5322899..5323029,5323091..5323498,5323556..5323797,5323867..5324303,5324925..5325200); ID=FBpp0087631; name=ced-6-PB; parent=FBgn0029092,FBtr0088548; dbxref=FlyBase:FBpp0087631,FlyBase_Annotation_IDs:CG1180 [fly-100309-contam.fasta]
  • type=protein; loc=2R:complement(5322780..5322839,5322899..5323029,5323091..5323498,5323556..5323797,5323867..5324303,5324925..5325200); ID=FBpp0087632; name=ced-6-PC; parent=FBgn0029092,FBtr0088549; dbxref=FlyBase:FBpp0087632,FlyBase_Annotation_IDs:CG1180 [fly-100309-contam.fasta]
  • type=protein; loc=2R:complement(5322780..5322839,5322899..5323029,5323091..5323498,5323556..5323797,5323867..5324303,5324925..5325200); ID=FBpp0087633; name=ced-6-PA; parent=FBgn0029092,FBtr0088550; dbxref=FlyBase:FBpp0087633,FlyBase_Annotation_IDs:CG1180 [fly-100309-contam.fasta]
  • LD19266p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG11804-PB, isoform B [Drosophila melanogaster] [nr-271106-contam.fasta]
  • ced-6 CG11804-PB, isoform B [Drosophila melanogaster] [nr-271106-contam.fasta]
  • ced-6 CG11804-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG11804-PC, isoform C [Drosophila melanogaster] [nr-271106-contam.fasta]
  • ced-6 CG11804-PC, isoform C [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CED-6 [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG11804-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2R:complement(5322780..5322839,5322899..5323029,5323091..5323498,5323556..5323797,5323867..5324303,5324925..5325200); ID=FBpp0087631; name=ced-6-PB; parent=FBgn0029092,FBtr0088548; dbxref=FlyBase:FBpp0087631,FlyBase_Annotation_IDs:CG11804-PB,GB_protein:AAF58937.1,REFSEQ:NP_724790,GB_protein:AAF58937; MD5=2dab452a6ea4a21fdf0b6bd163d73ab9; length=517; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:complement(5322780..5322839,5322899..5323029,5323091..5323498,5323556..5323797,5323867..5324303,5324925..5325200); ID=FBpp0087632; name=ced-6-PC; parent=FBgn0029092,FBtr0088549; dbxref=FlyBase:FBpp0087632,FlyBase_Annotation_IDs:CG11804-PC,GB_protein:AAM71067.1,REFSEQ:NP_610488,GB_protein:AAM71067; MD5=2dab452a6ea4a21fdf0b6bd163d73ab9; length=517; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:complement(5322780..5322839,5322899..5323029,5323091..5323498,5323556..5323797,5323867..5324303,5324925..5325200); ID=FBpp0087633; name=ced-6-PA; parent=FBgn0029092,FBtr0088550; dbxref=FlyBase:FBpp0087633,FlyBase_Annotation_IDs:CG11804-PA,GB_protein:AAG22292.1,REFSEQ:NP_724789,GB_protein:AAG22292; MD5=2dab452a6ea4a21fdf0b6bd163d73ab9; length=517; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:complement(5322780..5322839,5322899..5323029,5323091..5323498,5323556..5323797,5323867..5324303,5324925..5325200); ID=FBpp0087631; name=ced-6-PB; parent=FBgn0029092,FBtr0088548; dbxref=FlyBase:FBpp0087631,FlyBase_Annotation_IDs:CG11804-PB,GB_protein:AAF58937.1,REFSEQ:NP_724790,GB_protein:AAF58937; MD5=2dab452a6ea4a21fdf0b6bd163d73ab9; length=517; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • type=protein; loc=2R:complement(5322780..5322839,5322899..5323029,5323091..5323498,5323556..5323797,5323867..5324303,5324925..5325200); ID=FBpp0087632; name=ced-6-PC; parent=FBgn0029092,FBtr0088549; dbxref=FlyBase:FBpp0087632,FlyBase_Annotation_IDs:CG11804-PC,GB_protein:AAM71067.1,REFSEQ:NP_610488,GB_protein:AAM71067; MD5=2dab452a6ea4a21fdf0b6bd163d73ab9; length=517; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • type=protein; loc=2R:complement(5322780..5322839,5322899..5323029,5323091..5323498,5323556..5323797,5323867..5324303,5324925..5325200); ID=FBpp0087633; name=ced-6-PA; parent=FBgn0029092,FBtr0088550; dbxref=FlyBase:FBpp0087633,FlyBase_Annotation_IDs:CG11804-PA,GB_protein:AAG22292.1,REFSEQ:NP_724789,GB_protein:AAG22292; MD5=2dab452a6ea4a21fdf0b6bd163d73ab9; length=517; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Ced-6, isoform B OS=Drosophila melanogaster GN=ced-6 PE=4 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2R:complement(5322780..5322839,5322899..5323029,5323091..5323498,5323556..5323797,5323867..5324303,5324925..5325200); ID=FBpp0087631; name=ced-6-PB; parent=FBgn0029092,FBtr0088548; dbxref=FlyBase:FBpp0087631,FlyBase_Annotation_IDs:CG11804-PB,GB_protein:AAF58937.1,REFSEQ:NP_724790,GB_protein:AAF58937; MD5=2dab452a6ea4a21fdf0b6bd163d73ab9; length=517; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:complement(5322780..5322839,5322899..5323029,5323091..5323498,5323556..5323797,5323867..5324303,5324925..5325200); ID=FBpp0087632; name=ced-6-PC; parent=FBgn0029092,FBtr0088549; dbxref=FlyBase:FBpp0087632,FlyBase_Annotation_IDs:CG11804-PC,GB_protein:AAM71067.1,REFSEQ:NP_610488,GB_protein:AAM71067,FlyMine:FBpp0087632,modMine:FBpp0087632; MD5=2dab452a6ea4a21fdf0b6bd163d73ab9; length=517; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:complement(5322780..5322839,5322899..5323029,5323091..5323498,5323556..5323797,5323867..5324303,5324925..5325200); ID=FBpp0087633; name=ced-6-PA; parent=FBgn0029092,FBtr0088550; dbxref=FlyBase:FBpp0087633,FlyBase_Annotation_IDs:CG11804-PA,GB_protein:AAG22292.1,REFSEQ:NP_724789,GB_protein:AAG22292; MD5=2dab452a6ea4a21fdf0b6bd163d73ab9; length=517; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:complement(5322780..5322839,5322899..5323029,5323091..5323498,5323556..5323797,5323867..5324303,5324925..5325200); ID=FBpp0297721; name=ced-6-PE; parent=FBgn0029092,FBtr0306809; dbxref=REFSEQ:NP_001246226,GB_protein:AFH07981,FlyBase:FBpp0297721,FlyBase_Annotation_IDs:CG11804-PE; MD5=2dab452a6ea4a21fdf0b6bd163d73ab9; length=517; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:complement(join(9437420..9437695,9436362..9436798,9436051..9436292,9435586..9435993,9435394..9435524,9435275..9435334)); ID=FBpp0087631; name=ced-6-PB; parent=FBgn0029092,FBtr0088548; dbxref=FlyBase:FBpp0087631,FlyBase_Annotation_IDs:CG11804-PB,GB_protein:AAF58937.1,REFSEQ:NP_724790,GB_protein:AAF58937; MD5=2dab452a6ea4a21fdf0b6bd163d73ab9; length=517; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:complement(join(9437420..9437695,9436362..9436798,9436051..9436292,9435586..9435993,9435394..9435524,9435275..9435334)); ID=FBpp0087632; name=ced-6-PC; parent=FBgn0029092,FBtr0088549; dbxref=FlyBase:FBpp0087632,FlyBase_Annotation_IDs:CG11804-PC,GB_protein:AAM71067.1,REFSEQ:NP_610488,GB_protein:AAM71067,FlyMine:FBpp0087632,modMine:FBpp0087632; MD5=2dab452a6ea4a21fdf0b6bd163d73ab9; length=517; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:complement(join(9437420..9437695,9436362..9436798,9436051..9436292,9435586..9435993,9435394..9435524,9435275..9435334)); ID=FBpp0087633; name=ced-6-PA; parent=FBgn0029092,FBtr0088550; dbxref=FlyBase:FBpp0087633,FlyBase_Annotation_IDs:CG11804-PA,GB_protein:AAG22292.1,REFSEQ:NP_724789,GB_protein:AAG22292; MD5=2dab452a6ea4a21fdf0b6bd163d73ab9; length=517; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:complement(join(9437420..9437695,9436362..9436798,9436051..9436292,9435586..9435993,9435394..9435524,9435275..9435334)); ID=FBpp0087631; name=ced-6-PB; parent=FBgn0029092,FBtr0088548; dbxref=FlyBase:FBpp0087631,FlyBase_Annotation_IDs:CG11804-PB,GB_protein:AAF58937.1,REFSEQ:NP_724790,GB_protein:AAF58937; MD5=2dab452a6ea4a21fdf0b6bd163d73ab9; length=517; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=2R:complement(join(9437420..9437695,9436362..9436798,9436051..9436292,9435586..9435993,9435394..9435524,9435275..9435334)); ID=FBpp0087632; name=ced-6-PC; parent=FBgn0029092,FBtr0088549; dbxref=FlyBase:FBpp0087632,FlyBase_Annotation_IDs:CG11804-PC,GB_protein:AAM71067.1,REFSEQ:NP_610488,GB_protein:AAM71067,FlyMine:FBpp0087632,modMine:FBpp0087632; MD5=2dab452a6ea4a21fdf0b6bd163d73ab9; length=517; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=2R:complement(join(9437420..9437695,9436362..9436798,9436051..9436292,9435586..9435993,9435394..9435524,9435275..9435334)); ID=FBpp0087633; name=ced-6-PA; parent=FBgn0029092,FBtr0088550; dbxref=FlyBase:FBpp0087633,FlyBase_Annotation_IDs:CG11804-PA,GB_protein:AAG22292.1,REFSEQ:NP_724789,GB_protein:AAG22292; MD5=2dab452a6ea4a21fdf0b6bd163d73ab9; length=517; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Isoform of Q7JUY7, Ced-6, isoform B OS=Drosophila melanogaster GN=ced-6 PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0087631 type=protein; loc=2R:complement(join(9437420..9437695,9436362..9436798,9436051..9436292,9435586..9435993,9435394..9435524,9435275..9435334)); ID=FBpp0087631; name=ced-6-PB; parent=FBgn0029092,FBtr0088548; dbxref=FlyBase:FBpp0087631,FlyBase_Annotation_IDs:CG11804-PB,GB_protein:AAF58937.1,REFSEQ:NP_724790,GB_protein:AAF58937; MD5=2dab452a6ea4a21fdf0b6bd163d73ab9; length=517; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0087632 type=protein; loc=2R:complement(join(9437420..9437695,9436362..9436798,9436051..9436292,9435586..9435993,9435394..9435524,9435275..9435334)); ID=FBpp0087632; name=ced-6-PC; parent=FBgn0029092,FBtr0088549; dbxref=FlyBase:FBpp0087632,FlyBase_Annotation_IDs:CG11804-PC,GB_protein:AAM71067.1,REFSEQ:NP_610488,GB_protein:AAM71067,FlyMine:FBpp0087632,modMine:FBpp0087632; MD5=2dab452a6ea4a21fdf0b6bd163d73ab9; length=517; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0087633 type=protein; loc=2R:complement(join(9437420..9437695,9436362..9436798,9436051..9436292,9435586..9435993,9435394..9435524,9435275..9435334)); ID=FBpp0087633; name=ced-6-PA; parent=FBgn0029092,FBtr0088550; dbxref=FlyBase:FBpp0087633,FlyBase_Annotation_IDs:CG11804-PA,GB_protein:AAG22292.1,REFSEQ:NP_724789,GB_protein:AAG22292; MD5=2dab452a6ea4a21fdf0b6bd163d73ab9; length=517; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:complement(join(9437420..9437695,9436362..9436798,9436051..9436292,9435586..9435993,9435394..9435524,9435275..9435334)); ID=FBpp0087631; name=ced-6-PB; parent=FBgn0029092,FBtr0088548; dbxref=FlyBase:FBpp0087631,FlyBase_Annotation_IDs:CG11804-PB,GB_protein:AAF58937.1,REFSEQ:NP_724790,GB_protein:AAF58937,UniProt/Swiss-Prot:Q7JUY7; MD5=2dab452a6ea4a21fdf0b6bd163d73ab9; length=517; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=2R:complement(join(9437420..9437695,9436362..9436798,9436051..9436292,9435586..9435993,9435394..9435524,9435275..9435334)); ID=FBpp0087632; name=ced-6-PC; parent=FBgn0029092,FBtr0088549; dbxref=FlyBase:FBpp0087632,FlyBase_Annotation_IDs:CG11804-PC,GB_protein:AAM71067.1,REFSEQ:NP_610488,GB_protein:AAM71067,UniProt/Swiss-Prot:Q7JUY7,FlyMine:FBpp0087632,modMine:FBpp0087632; MD5=2dab452a6ea4a21fdf0b6bd163d73ab9; length=517; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=2R:complement(join(9437420..9437695,9436362..9436798,9436051..9436292,9435586..9435993,9435394..9435524,9435275..9435334)); ID=FBpp0087633; name=ced-6-PA; parent=FBgn0029092,FBtr0088550; dbxref=FlyBase:FBpp0087633,FlyBase_Annotation_IDs:CG11804-PA,GB_protein:AAG22292.1,REFSEQ:NP_724789,GB_protein:AAG22292,UniProt/Swiss-Prot:Q7JUY7; MD5=2dab452a6ea4a21fdf0b6bd163d73ab9; length=517; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 517 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: mushroom body development [IMP]
    Molecular Function: protein binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPYQPANSGG TSGGSKAAAK MAQLKFWNKQ NSSKQQQQDK DKDAADGGNN TSGGGTGSNS  60
   61 NGDAKSEAKN GKRNWLHTPE QLISGHAVYL VKFFGNLSVD QPKGIEVVKE AIRKLQFAQQ 120
  121 MKKAETGTQE KFKKLEITIS IKGVAIQEPR THKILHQFPL YNISYCADEK GVKKFFSFIA 180
  181 KTVKTQDGSD PTSNGHANGN GDGSAKVEES HECFVFISNK LASDITLTIG QAFDLAYRKY 240
  241 MDSTEKTNLS KAQQQINHLQ QTVNVYKERL REVSAKLPKA ELDALLFNLG IKDILEAPTT 300
  301 EPQNGIEVAS EALSNGKLDD DKLLIDTNST TASTHSASPS SFLPIVPPRN NLSSQISIGG 360
  361 KSNSQKMDEL LLNSDSDSDF DPRADETQEI GGTGRSAISN MFGFEPANSF GQHLFSNNND 420
  421 HKLQNNNSSL LITSNNNSIN SSGFSSELNI TPPLLAPPPK IAAPRRLNSV TTGNGLNGNT 480
  481 DLFGSDPFEL NNGPNIFKQN QLNLDDFSLE SLDPLRK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..243] PSI-BLAST 49.221849 Coupling of Folding and Binding in the PTB Domain of the Signaling Protein Shc
    2 View Details [244..517] MSA 7.204997 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.5144141194236 bayes_pls_golite062009
  • protein binding
    		•  1.42613583294271 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle