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Protein Overview: ced-6-PC, ced-6-...

General Information:
Name(s) found: ced-6-PA / FBpp0087633 [FlyBase]
ced-6-PC / FBpp0087632 [FlyBase]
ced-6-PB / FBpp0087631 [FlyBase]
Description(s) found:
Found 55 descriptions.
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  • The gene ced-6 is referred to in FlyBase by the symbol Dmel\ced-6 (CG11804, FBgn0029092). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:5322174..5329065. It has the cytological map location 45D7-45D8. There is experimental evidence that it has the molecular function</span>: protein binding. There is experimental evidence that it is involved in the biological process</span>: mushroom body development. 6 alleles are reported. No phenotypic data is available. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
  • The gene ced-6 is referred to in FlyBase by the symbol Dmel\ced-6 (CG11804, FBgn0029092). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:5322174..5329065. It has the cytological map location 45D7-45D8. There is experimental evidence that it has the molecular function</span>: protein binding. There is experimental evidence that it is involved in the biological process</span>: mushroom body development. 6 alleles are reported. No phenotypic data is available. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
  • The gene ced-6 is referred to in FlyBase by the symbol Dmel\ced-6 (CG11804, FBgn0029092). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:5322174..5329065. It has the cytological map location 45D7-45D8. There is experimental evidence that it has the molecular function</span>: protein binding. There is experimental evidence that it is involved in the biological process</span>: mushroom body development. 6 alleles are reported. No phenotypic data is available. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 517 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: mushroom body development [IMP]
    Molecular Function: protein binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPYQPANSGG TSGGSKAAAK MAQLKFWNKQ NSSKQQQQDK DKDAADGGNN TSGGGTGSNS  60
   61 NGDAKSEAKN GKRNWLHTPE QLISGHAVYL VKFFGNLSVD QPKGIEVVKE AIRKLQFAQQ 120
  121 MKKAETGTQE KFKKLEITIS IKGVAIQEPR THKILHQFPL YNISYCADEK GVKKFFSFIA 180
  181 KTVKTQDGSD PTSNGHANGN GDGSAKVEES HECFVFISNK LASDITLTIG QAFDLAYRKY 240
  241 MDSTEKTNLS KAQQQINHLQ QTVNVYKERL REVSAKLPKA ELDALLFNLG IKDILEAPTT 300
  301 EPQNGIEVAS EALSNGKLDD DKLLIDTNST TASTHSASPS SFLPIVPPRN NLSSQISIGG 360
  361 KSNSQKMDEL LLNSDSDSDF DPRADETQEI GGTGRSAISN MFGFEPANSF GQHLFSNNND 420
  421 HKLQNNNSSL LITSNNNSIN SSGFSSELNI TPPLLAPPPK IAAPRRLNSV TTGNGLNGNT 480
  481 DLFGSDPFEL NNGPNIFKQN QLNLDDFSLE SLDPLRK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..243] PSI-BLAST 49.221849 Coupling of Folding and Binding in the PTB Domain of the Signaling Protein Shc
    2 View Details [244..517] MSA 7.204997 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.5144141194236 bayes_pls_golite062009
  • protein binding
    		•  1.42613583294271 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle