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Protein Overview: Lcp4-PA, FBpp0305733

General Information:
Name(s) found: FBpp0305733 [FlyBase]
Lcp4-PA / FBpp0087823 [FlyBase]
Description(s) found:
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  • pir||D25299 cuticle protein IV precursor - fruit fly (Drosophila melanogaster) [NCBI NR]
  • gi|7304054|gb|AAF59093.1| larval cuticle protein 4 [Drosophila melanogaster] [NCBI NR]
  • gi|17136302|ref|NP_476622.1| larval cuticle protein 4 [Drosophila melanogaster] [NCBI NR]
  • gi|117636|sp|P07189.2|LCP4_DROME RecName: Full=Larval cuticle protein 4; AltName: Full=Larval cuticle protein IV; Flags: Precursor [NCBI NR]
  • Larval cuticle protein 4 OS=Drosophila melanogaster GN=Lcp4 PE=1 SV=2 [Swiss-Prot]
  • type=protein; loc=2R:join(4325201..4325212,4325270..4325596); ID=FBpp0305733; name=Lcp4-PB; parent=FBgn0002535,FBtr0333555; dbxref=REFSEQ:NP_001260804,GB_protein:AGB93337,FlyBase:FBpp0305733,FlyBase_Annotation_IDs:CG2044-PB; MD5=da35bec3381fd9ecd964a8a303e4cb07; length=112; release=r5.56; species=Dmel; [FlyBase]
  • The gene Larval cuticle protein 4 is referred to in FlyBase by the symbol Dmel\Lcp4 (CG2044, FBgn0002535). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:4325162..4325908. It has the cytological map location 44D1. Based on sequence similarity, it is predicted to have molecular function</span>: structural constituent of chitin-based cuticle. The biological processes in which it is involved are not known. 4 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG2044-PA translation from_gene[CG2044 Lcp4 FBgn0002535] seq_release:3 mol_weight=11980 cds_boundaries:(2R:3,498,443..3,498,835[+]) aa_length:112 transcript_info:[CG2044-RA seq_release:3] gene_info:[gene symbol:Lcp4 FBgn0002535 gene_boundaries:(2R:3,4 [hmr_yeast5_DM3-1_pombe.fasta]
  • (P07189) Larval cuticle protein IV precursor [DrosMelano7227.FASTAC.txt]
  • (AE003837) Lcp4 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG2044-PA [Drosophila melanogaster]gi|17136302|ref|NP_476622.1| CG2044-PA [Drosophila melanogaster]gi|85226|pir||D25299 cuticle protein IV precursor - fruit fly (Drosophila melanogaster)gi|117636|sp|P07189|LCP4_DROME Larval cuticle protein IV precursor [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:join(4325201..4325212,4325270..4325596); ID=FBpp0087823; name=Lcp4-PA; parent=FBgn0002535,FBtr0088744; dbxref=FlyBase:FBpp0087823,FlyBase_Annotation_IDs:CG2044-PA,GB_protein:AAF59093.1,REFSEQ:NP_476622,GB_protein:AAF59093; MD5=da35bec [fly-100309-contam.fasta]
  • Larval cuticle protein 4 precursor (Larval cuticle protein IV) [nr-271106-contam.fasta]
  • CG2044-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Larval cuticle protein 4 CG2044-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2R:join(4325201..4325212,4325270..4325596); ID=FBpp0087823; name=Lcp4-PA; parent=FBgn0002535,FBtr0088744; dbxref=FlyBase:FBpp0087823,FlyBase_Annotation_IDs:CG2044-PA,GB_protein:AAF59093.1,REFSEQ:NP_476622,GB_protein:AAF59093; MD5=da35bec3381fd9ecd964a8a303e4cb07; length=112; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:join(4325201..4325212,4325270..4325596); ID=FBpp0087823; name=Lcp4-PA; parent=FBgn0002535,FBtr0088744; dbxref=FlyBase:FBpp0087823,FlyBase_Annotation_IDs:CG2044-PA,GB_protein:AAF59093.1,REFSEQ:NP_476622,GB_protein:AAF59093; MD5=da35bec3381fd9ecd964a8a303e4cb07; length=112; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • type=protein; loc=2R:join(4325201..4325212,4325270..4325596); ID=FBpp0087823; name=Lcp4-PA; parent=FBgn0002535,FBtr0088744; dbxref=FlyBase:FBpp0087823,FlyBase_Annotation_IDs:CG2044-PA,GB_protein:AAF59093.1,REFSEQ:NP_476622,GB_protein:AAF59093,FlyMine:FBpp0087823,modMine:FBpp0087823; MD5=da35bec3381fd9ecd964a8a303e4cb07; length=112; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:join(4325201..4325212,4325270..4325596); ID=FBpp0305733; name=Lcp4-PB; parent=FBgn0002535,FBtr0333555; dbxref=FlyBase:FBpp0305733,FlyBase_Annotation_IDs:CG2044-PB; MD5=da35bec3381fd9ecd964a8a303e4cb07; length=112; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:join(8437696..8437707,8437765..8438091); ID=FBpp0087823; name=Lcp4-PA; parent=FBgn0002535,FBtr0088744; dbxref=FlyBase:FBpp0087823,FlyBase_Annotation_IDs:CG2044-PA,GB_protein:AAF59093.1,REFSEQ:NP_476622,GB_protein:AAF59093,FlyMine:FBpp0087823,modMine:FBpp0087823; MD5=da35bec3381fd9ecd964a8a303e4cb07; length=112; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:join(8437696..8437707,8437765..8438091); ID=FBpp0305733; name=Lcp4-PB; parent=FBgn0002535,FBtr0333555; dbxref=REFSEQ:NP_001260804,GB_protein:AGB93337,FlyBase:FBpp0305733,FlyBase_Annotation_IDs:CG2044-PB; MD5=da35bec3381fd9ecd964a8a303e4cb07; length=112; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:join(8437696..8437707,8437765..8438091); ID=FBpp0305733; name=Lcp4-PB; parent=FBgn0002535,FBtr0333555; dbxref=REFSEQ:NP_001260804,GB_protein:AGB93337,FlyBase:FBpp0305733,FlyBase_Annotation_IDs:CG2044-PB; MD5=da35bec3381fd9ecd964a8a303e4cb07; length=112; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=2R:join(8437696..8437707,8437765..8438091); ID=FBpp0087823; name=Lcp4-PA; parent=FBgn0002535,FBtr0088744; dbxref=FlyBase:FBpp0087823,FlyBase_Annotation_IDs:CG2044-PA,GB_protein:AAF59093.1,REFSEQ:NP_476622,GB_protein:AAF59093,FlyMine:FBpp0087823,modMine:FBpp0087823; MD5=da35bec3381fd9ecd964a8a303e4cb07; length=112; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Isoform of P07189, Larval cuticle protein 4, isoform B OS=Drosophila melanogaster GN=Lcp4 PE=4 SV=1 [DROME.fasta.20160308]
  • FBpp0087823 type=protein; loc=2R:join(8437696..8437707,8437765..8438091); ID=FBpp0087823; name=Lcp4-PA; parent=FBgn0002535,FBtr0088744; dbxref=FlyBase:FBpp0087823,FlyBase_Annotation_IDs:CG2044-PA,GB_protein:AAF59093.1,REFSEQ:NP_476622,GB_protein:AAF59093,FlyMine:FBpp0087823,modMine:FBpp0087823; MD5=da35bec3381fd9ecd964a8a303e4cb07; length=112; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0305733 type=protein; loc=2R:join(8437696..8437707,8437765..8438091); ID=FBpp0305733; name=Lcp4-PB; parent=FBgn0002535,FBtr0333555; dbxref=REFSEQ:NP_001260804,GB_protein:AGB93337,FlyBase:FBpp0305733,FlyBase_Annotation_IDs:CG2044-PB; MD5=da35bec3381fd9ecd964a8a303e4cb07; length=112; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:join(8437696..8437707,8437765..8438091); ID=FBpp0087823; name=Lcp4-PA; parent=FBgn0002535,FBtr0088744; dbxref=FlyBase:FBpp0087823,FlyBase_Annotation_IDs:CG2044-PA,GB_protein:AAF59093.1,REFSEQ:NP_476622,GB_protein:AAF59093,UniProt/Swiss-Prot:P07189,FlyMine:FBpp0087823,modMine:FBpp0087823; MD5=da35bec3381fd9ecd964a8a303e4cb07; length=112; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=2R:join(8437696..8437707,8437765..8438091); ID=FBpp0305733; name=Lcp4-PB; parent=FBgn0002535,FBtr0333555; dbxref=REFSEQ:NP_001260804,GB_protein:AGB93337,FlyBase:FBpp0305733,FlyBase_Annotation_IDs:CG2044-PB,UniProt/Swiss-Prot:P07189; MD5=da35bec3381fd9ecd964a8a303e4cb07; length=112; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 112 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: structural constituent of chitin-based larval cuticle [NAS]
    structural constituent of chitin-based cuticle [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKILLVCAL VALVAANENP EVKELVNDVQ ADGFVSKLVL DNGSAASATG DVHGNIDGVF  60
   61 EWVSPEGEHV RVSYKADENG YQPQSDLLPT PPPIPEAILK AIAYIQAHPS KE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..112] Pfam 21.356547 No description for PF00379.14 was found. Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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