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View Structure Prediction Details

Protein: Lcp4-PA, FBpp0305733
Organism: Drosophila melanogaster
Length: 112 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Lcp4-PA, FBpp0305733.

Description E-value Query
Range
Subject
Range
gi|108875723, gi... - gi|157118418|ref|XP_001659105.1| Pupal cuticle protein, putative [Aedes aegypti], gi|108875723|gb|EA...
142.0 [0..1] [112..1]
AGAP009875-PA - CPR77: cuticular protein RR-1 family (CPR77)|protein_coding|3R:44651286:44651883:-1|gene:AGAP009875
gi|158298840, gi... - gi|58391952|ref|XP_318995.2| ENSANGP00000014836 [Anopheles gambiae str. PEST], gi|55236096|gb|EAA144...
135.0 [0..1] [106..1]
gi|91083823 - gi|91083823|ref|XP_973633.1| PREDICTED: similar to Cuticular protein 65Az CG12330-PA [Tribolium cast...
130.0 [0..2] [112..249]
gi|7775 - gi|7775|emb|CAA23490.1| cuticle IV [Drosophila melanogaster]
129.0 [0..1] [112..1]

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Predicted Domain #1
Region A:
Residues: [1-112]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKILLVCAL VALVAANENP EVKELVNDVQ ADGFVSKLVL DNGSAASATG DVHGNIDGVF  60
   61 EWVSPEGEHV RVSYKADENG YQPQSDLLPT PPPIPEAILK AIAYIQAHPS KE

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 21.356547
Match: PF00379.14
Description: No description for PF00379.14 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.949 N/A N/A d.105.1 Clathrin adaptor appendage, alpha and beta chain-specific domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle