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Protein Overview: Lcp1-PA, FBpp0305735

General Information:
Name(s) found: FBpp0305735 [FlyBase]
Lcp1-PA / FBpp0087841 [FlyBase]
Description(s) found:
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  • gi|7304057|gb|AAF59096.1| larval cuticle protein 1 [Drosophila melanogaster] [NCBI NR]
  • gi|17380379|sp|P02839.3|LCP1_DROME RecName: Full=Larval cuticle protein 1; AltName: Full=Larval cuticle protein I; Flags: Precursor [NCBI NR]
  • gi|17136296|ref|NP_476619.1| larval cuticle protein 1 [Drosophila melanogaster] [NCBI NR]
  • Larval cuticle protein 1 OS=Drosophila melanogaster GN=Lcp1 PE=1 SV=3 [Swiss-Prot]
  • type=protein; loc=2R:complement(4318250..4318630,4318695..4318706); ID=FBpp0305735; name=Lcp1-PB; parent=FBgn0002531,FBtr0333557; dbxref=REFSEQ:NP_001260801,GB_protein:AGB93334,FlyBase:FBpp0305735,FlyBase_Annotation_IDs:CG11650-PB; MD5=f2d125eec553895318f773fd2f24b137; length=130; release=r5.56; species=Dmel; [FlyBase]
  • The gene Larval cuticle protein 1 is referred to in FlyBase by the symbol Dmel\Lcp1 (CG11650, FBgn0002531). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:4318139..4318737. It has the cytological map location 44C6. Based on sequence similarity, it is predicted to have molecular function</span>: structural constituent of chitin-based cuticle. The biological processes in which it is involved are not known. 4 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG11650-PA translation from_gene[CG11650 Lcp1 FBgn0002531] seq_release:3 mol_weight=13921 cds_boundaries:(2R:3,491,495..3,491,948[-]) aa_length:130 transcript_info:[CG11650-RA seq_release:3] gene_info:[gene symbol:Lcp1 FBgn0002531 gene_boundaries:(2R: [hmr_yeast5_DM3-1_pombe.fasta]
  • (P02839) Larval cuticle protein I precursor [DrosMelano7227.FASTAC.txt]
  • (AE003837) Lcp1 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG11650-PA [Drosophila melanogaster]gi|17136296|ref|NP_476619.1| CG11650-PA [Drosophila melanogaster]gi|17380379|sp|P02839|LCP1_DROME Larval cuticle protein I precursor [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:complement(4318250..4318630,4318695..4318706); ID=FBpp0087841; name=Lcp1-PA; parent=FBgn0002531,FBtr0088763; dbxref=FlyBase:FBpp0087841,FlyBase_Annotation_IDs:CG11650-PA,GB_protein:AAF59096.1,REFSEQ:NP_476619,GB_protein:AAF59096; MD5= [fly-100309-contam.fasta]
  • Larval cuticle protein 1 CG11650-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG11650-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Larval cuticle protein 1 precursor (Larval cuticle protein I) [nr-271106-contam.fasta]
  • type=protein; loc=2R:complement(4318250..4318630,4318695..4318706); ID=FBpp0087841; name=Lcp1-PA; parent=FBgn0002531,FBtr0088763; dbxref=FlyBase:FBpp0087841,FlyBase_Annotation_IDs:CG11650-PA,GB_protein:AAF59096.1,REFSEQ:NP_476619,GB_protein:AAF59096; MD5=f2d125eec553895318f773fd2f24b137; length=130; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:complement(4318250..4318630,4318695..4318706); ID=FBpp0087841; name=Lcp1-PA; parent=FBgn0002531,FBtr0088763; dbxref=FlyBase:FBpp0087841,FlyBase_Annotation_IDs:CG11650-PA,GB_protein:AAF59096.1,REFSEQ:NP_476619,GB_protein:AAF59096; MD5=f2d125eec553895318f773fd2f24b137; length=130; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • type=protein; loc=2R:complement(4318250..4318630,4318695..4318706); ID=FBpp0087841; name=Lcp1-PA; parent=FBgn0002531,FBtr0088763; dbxref=FlyBase:FBpp0087841,FlyBase_Annotation_IDs:CG11650-PA,GB_protein:AAF59096.1,REFSEQ:NP_476619,GB_protein:AAF59096,FlyMine:FBpp0087841,modMine:FBpp0087841; MD5=f2d125eec553895318f773fd2f24b137; length=130; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:complement(4318250..4318630,4318695..4318706); ID=FBpp0305735; name=Lcp1-PB; parent=FBgn0002531,FBtr0333557; dbxref=FlyBase:FBpp0305735,FlyBase_Annotation_IDs:CG11650-PB; MD5=f2d125eec553895318f773fd2f24b137; length=130; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:complement(join(8431190..8431201,8430745..8431125)); ID=FBpp0087841; name=Lcp1-PA; parent=FBgn0002531,FBtr0088763; dbxref=FlyBase:FBpp0087841,FlyBase_Annotation_IDs:CG11650-PA,GB_protein:AAF59096.1,REFSEQ:NP_476619,GB_protein:AAF59096,FlyMine:FBpp0087841,modMine:FBpp0087841; MD5=f2d125eec553895318f773fd2f24b137; length=130; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:complement(join(8431190..8431201,8430745..8431125)); ID=FBpp0305735; name=Lcp1-PB; parent=FBgn0002531,FBtr0333557; dbxref=REFSEQ:NP_001260801,GB_protein:AGB93334,FlyBase:FBpp0305735,FlyBase_Annotation_IDs:CG11650-PB; MD5=f2d125eec553895318f773fd2f24b137; length=130; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:complement(join(8431190..8431201,8430745..8431125)); ID=FBpp0305735; name=Lcp1-PB; parent=FBgn0002531,FBtr0333557; dbxref=REFSEQ:NP_001260801,GB_protein:AGB93334,FlyBase:FBpp0305735,FlyBase_Annotation_IDs:CG11650-PB; MD5=f2d125eec553895318f773fd2f24b137; length=130; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=2R:complement(join(8431190..8431201,8430745..8431125)); ID=FBpp0087841; name=Lcp1-PA; parent=FBgn0002531,FBtr0088763; dbxref=FlyBase:FBpp0087841,FlyBase_Annotation_IDs:CG11650-PA,GB_protein:AAF59096.1,REFSEQ:NP_476619,GB_protein:AAF59096,FlyMine:FBpp0087841,modMine:FBpp0087841; MD5=f2d125eec553895318f773fd2f24b137; length=130; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Isoform of P02839, Larval cuticle protein 1, isoform B OS=Drosophila melanogaster GN=Lcp1 PE=4 SV=1 [DROME.fasta.20160308]
  • FBpp0087841 type=protein; loc=2R:complement(join(8431190..8431201,8430745..8431125)); ID=FBpp0087841; name=Lcp1-PA; parent=FBgn0002531,FBtr0088763; dbxref=FlyBase:FBpp0087841,FlyBase_Annotation_IDs:CG11650-PA,GB_protein:AAF59096.1,REFSEQ:NP_476619,GB_protein:AAF59096,FlyMine:FBpp0087841,modMine:FBpp0087841; MD5=f2d125eec553895318f773fd2f24b137; length=130; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0305735 type=protein; loc=2R:complement(join(8431190..8431201,8430745..8431125)); ID=FBpp0305735; name=Lcp1-PB; parent=FBgn0002531,FBtr0333557; dbxref=REFSEQ:NP_001260801,GB_protein:AGB93334,FlyBase:FBpp0305735,FlyBase_Annotation_IDs:CG11650-PB; MD5=f2d125eec553895318f773fd2f24b137; length=130; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:complement(join(8431190..8431201,8430745..8431125)); ID=FBpp0087841; name=Lcp1-PA; parent=FBgn0002531,FBtr0088763; dbxref=FlyBase:FBpp0087841,FlyBase_Annotation_IDs:CG11650-PA,GB_protein:AAF59096.1,REFSEQ:NP_476619,GB_protein:AAF59096,UniProt/Swiss-Prot:P02839,FlyMine:FBpp0087841,modMine:FBpp0087841; MD5=f2d125eec553895318f773fd2f24b137; length=130; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=2R:complement(join(8431190..8431201,8430745..8431125)); ID=FBpp0305735; name=Lcp1-PB; parent=FBgn0002531,FBtr0333557; dbxref=REFSEQ:NP_001260801,GB_protein:AGB93334,FlyBase:FBpp0305735,FlyBase_Annotation_IDs:CG11650-PB,UniProt/Swiss-Prot:P02839; MD5=f2d125eec553895318f773fd2f24b137; length=130; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 130 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: structural constituent of chitin-based larval cuticle [NAS]
    structural constituent of chitin-based cuticle [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKFVMICAV LGLAVANPPV PHSLGRSEDV HADVLSQSDD VRADGFDSSL HTSNGIEQAA  60
   61 SGDAHGNIHG NFGWISPEGE HVEVKYVANE NGYQPSGAWI PTPPPIPEAI ARAVAWLESH 120
  121 PPAPEHPRHH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..130] Pfam 23.376751 No description for PF00379.14 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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