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Protein Overview: Obp44a-PA, FBpp0...

General Information:
Name(s) found: FBpp0308406 [FlyBase]
Obp44a-PA / FBpp0087892 [FlyBase]
Description(s) found:
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  • gi|7304088|gb|AAF59126.1| Obp44a [Drosophila melanogaster] [NCBI NR]
  • gi|19921806|ref|NP_610358.1| Obp44a [Drosophila melanogaster] [NCBI NR]
  • gi|17944488|gb|AAL48133.1| RH04549p [Drosophila melanogaster] [NCBI NR]
  • type=protein; loc=2R:complement(4022015..4022401,4022472..4022516); ID=FBpp0308406; name=Obp44a-PB; parent=FBgn0033268,FBtr0339297; dbxref=FlyBase:FBpp0308406,FlyBase_Annotation_IDs:CG2297-PB; MD5=a4dba22348ec9bf6b32d149728ecddbc; length=143; release=r5.56; species=Dmel; [FlyBase]
  • The gene Obp44a is referred to in FlyBase by the symbol Dmel\Obp44a (CG2297, FBgn0033268). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:4021870..4022596. It has the cytological map location 44B3. Based on sequence similarity, it is predicted to have molecular function</span>: odorant binding. Based on sequence similarity, it is predicted to be involved in the biological process</span>: sensory perception of chemical stimulus. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG2297-PA translation from_gene[CG2297 Obp44a FBgn0033268] seq_release:3 mol_weight=15860 cds_boundaries:(2R:3,195,260..3,195,758[-]) aa_length:143 transcript_info:[CG2297-RA seq_release:3] gene_info:[gene symbol:Obp44a FBgn0033268 gene_boundaries:(2R [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9V373) CG2297 protein (RH04549p) [DrosMelano7227.FASTAC.txt]
  • (AE003838) CG2297 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG2297-PA [Drosophila melanogaster]gi|17944488|gb|AAL48133.1| RH04549p [Drosophila melanogaster]gi|19921806|ref|NP_610358.1| CG2297-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:complement(4022015..4022401,4022472..4022516); ID=FBpp0087892; name=Obp44a-PA; parent=FBgn0033268,FBtr0088816; dbxref=FlyBase:FBpp0087892,FlyBase_Annotation_IDs:CG2297-PA,GB_protein:AAF59126.1,REFSEQ:NP_610358,GB_protein:AAF59126; MD5 [fly-100309-contam.fasta]
  • CG2297-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • RH04549p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Obp44a CG2297-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2R:complement(4022015..4022401,4022472..4022516); ID=FBpp0087892; name=Obp44a-PA; parent=FBgn0033268,FBtr0088816; dbxref=FlyBase:FBpp0087892,FlyBase_Annotation_IDs:CG2297-PA,GB_protein:AAF59126.1,REFSEQ:NP_610358,GB_protein:AAF59126; MD5=a4dba22348ec9bf6b32d149728ecddbc; length=143; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:complement(4022015..4022401,4022472..4022516); ID=FBpp0087892; name=Obp44a-PA; parent=FBgn0033268,FBtr0088816; dbxref=FlyBase:FBpp0087892,FlyBase_Annotation_IDs:CG2297-PA,GB_protein:AAF59126.1,REFSEQ:NP_610358,GB_protein:AAF59126; MD5=a4dba22348ec9bf6b32d149728ecddbc; length=143; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Obp44a OS=Drosophila melanogaster GN=Obp44a PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2R:complement(4022015..4022401,4022472..4022516); ID=FBpp0087892; name=Obp44a-PA; parent=FBgn0033268,FBtr0088816; dbxref=FlyBase:FBpp0087892,FlyBase_Annotation_IDs:CG2297-PA,GB_protein:AAF59126.1,REFSEQ:NP_610358,GB_protein:AAF59126,FlyMine:FBpp0087892,modMine:FBpp0087892; MD5=a4dba22348ec9bf6b32d149728ecddbc; length=143; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:complement(join(8134967..8135011,8134510..8134896)); ID=FBpp0087892; name=Obp44a-PA; parent=FBgn0033268,FBtr0088816; dbxref=FlyBase:FBpp0087892,FlyBase_Annotation_IDs:CG2297-PA,GB_protein:AAF59126.1,REFSEQ:NP_610358,GB_protein:AAF59126,FlyMine:FBpp0087892,modMine:FBpp0087892; MD5=a4dba22348ec9bf6b32d149728ecddbc; length=143; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:complement(join(8134967..8135011,8134510..8134896)); ID=FBpp0308406; name=Obp44a-PB; parent=FBgn0033268,FBtr0339297; dbxref=GB_protein:AHN55984,REFSEQ:NP_001286186,FlyBase:FBpp0308406,FlyBase_Annotation_IDs:CG2297-PB; MD5=a4dba22348ec9bf6b32d149728ecddbc; length=143; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:complement(join(8134967..8135011,8134510..8134896)); ID=FBpp0087892; name=Obp44a-PA; parent=FBgn0033268,FBtr0088816; dbxref=FlyBase:FBpp0087892,FlyBase_Annotation_IDs:CG2297-PA,GB_protein:AAF59126.1,REFSEQ:NP_610358,GB_protein:AAF59126,FlyMine:FBpp0087892,modMine:FBpp0087892; MD5=a4dba22348ec9bf6b32d149728ecddbc; length=143; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=2R:complement(join(8134967..8135011,8134510..8134896)); ID=FBpp0308406; name=Obp44a-PB; parent=FBgn0033268,FBtr0339297; dbxref=GB_protein:AHN55984,REFSEQ:NP_001286186,FlyBase:FBpp0308406,FlyBase_Annotation_IDs:CG2297-PB; MD5=a4dba22348ec9bf6b32d149728ecddbc; length=143; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Odorant-binding protein 44a, isoform A OS=Drosophila melanogaster GN=Obp44a PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0087892 type=protein; loc=2R:complement(join(8134967..8135011,8134510..8134896)); ID=FBpp0087892; name=Obp44a-PA; parent=FBgn0033268,FBtr0088816; dbxref=FlyBase:FBpp0087892,FlyBase_Annotation_IDs:CG2297-PA,GB_protein:AAF59126.1,REFSEQ:NP_610358,GB_protein:AAF59126,FlyMine:FBpp0087892,modMine:FBpp0087892; MD5=a4dba22348ec9bf6b32d149728ecddbc; length=143; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0308406 type=protein; loc=2R:complement(join(8134967..8135011,8134510..8134896)); ID=FBpp0308406; name=Obp44a-PB; parent=FBgn0033268,FBtr0339297; dbxref=GB_protein:AHN55984,REFSEQ:NP_001286186,FlyBase:FBpp0308406,FlyBase_Annotation_IDs:CG2297-PB; MD5=a4dba22348ec9bf6b32d149728ecddbc; length=143; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:complement(join(8134967..8135011,8134510..8134896)); ID=FBpp0087892; name=Obp44a-PA; parent=FBgn0033268,FBtr0088816; dbxref=FlyBase:FBpp0087892,FlyBase_Annotation_IDs:CG2297-PA,GB_protein:AAF59126.1,REFSEQ:NP_610358,GB_protein:AAF59126,UniProt/TrEMBL:Q7K084,FlyMine:FBpp0087892,modMine:FBpp0087892; MD5=a4dba22348ec9bf6b32d149728ecddbc; length=143; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=2R:complement(join(8134967..8135011,8134510..8134896)); ID=FBpp0308406; name=Obp44a-PB; parent=FBgn0033268,FBtr0339297; dbxref=GB_protein:AHN55984,REFSEQ:NP_001286186,FlyBase:FBpp0308406,FlyBase_Annotation_IDs:CG2297-PB,UniProt/TrEMBL:Q7K084; MD5=a4dba22348ec9bf6b32d149728ecddbc; length=143; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 143 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: sensory perception of chemical stimulus [UNKNOWN]
    transport [IEA]
    Molecular Function: odorant binding [UNKNOWN][IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNAVAILLC ALLGLASASD YKLRTAEDLQ SARKECAASS KVTEALIAKY KTFDYPDDDI  60
   61 TRNYIQCIFV KFDLFDEAKG FKVENLVAQL GQGKEDKAAL KADIEKCADK NEQKSPANEW 120
  121 AFRGFKCFLG KNLPLVQAAV QKN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..143] PSI-BLAST 21.39794 Pheromone binding protein

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • odorant binding
    		•  5.06322454789787 bayes_pls_golite062009
  • pheromone binding
    		•  3.11551486454066 bayes_pls_golite062009
  • phenylalkylamine binding
    		•  1.62981757488245 bayes_pls_golite062009
  • binding
    		•  1.40235773612936 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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