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Protein Overview: CG1550-PA

General Information:
Name(s) found: CG1550-PA / FBpp0087973 [FlyBase]
Description(s) found:
Found 20 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG1550 (CG1550, FBgn0033225). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:3697580..3699540. It has the cytological map location 43E18. Based on sequence similarity, it is predicted to have molecular function</span>: tubulin-tyrosine ligase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: protein modification process. 5 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 626 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: protein modification process [IEA]
    Molecular Function: tubulin-tyrosine ligase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGINKYNEF VALHKPQLES SGIPLIFWPA LFRKLTTETF DAGEALQLML IDYDEDEQQN  60
   61 PAEDDDSPNP VFALGVAREQ GIKASDPQAI YLVDHAWTFR LNGARQQLEE YPQLAERLSA 120
  121 ITGVDLELKD RVDKILRRLW KYCHAYSIGS EGLSDEERQP IWYVMDEVGS AVNHSDDPNF 180
  181 RLVPLLYLNT QTTYSVLFPI RDCDVGEAVT RDMVEHVAKD APQRPALLLP WRDADLTGES 240
  241 FLQVEPRADY FTSGHIPETY PKGDTVPLPA RSRCDPLKVY AEYEVVRRHL TSSEFILVNN 300
  301 ADEADVLWLT HHFKNFEDFA DRSPGKFINQ FPFEYVITIK DLLSIVGRRA AKEHHDSLTL 360
  361 ETFPAWLPTT YNLSTEVKEF AAYYQTRAAK GLDNHWIIKP WNLARGLDTH ITDNIKQIVR 420
  421 LPATGPKIAQ KYIERPVLFS RQEVEGSVKF DIRYVILLKS VKPLKAYIHR KFFLRFANHP 480
  481 FTLDHFDDYE KHYTVMNYQT EAQLHHVKCD DFLTLWQEQY PDNDWSALEQ QICSMLLEVL 540
  541 QCASQADPPC GLAPCAQSRA LYAADIMLRW KDDKEKLMEP QLLEINWTPD CKRACDYYPD 600
  601 FFNDIFRLLF LDEENDDSFR VLTPDN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..214] MSA 2.016951 View MSA. No confident structure predictions are available.
    2 View Details [215..265] MSA 1.122996 View MSA. No confident structure predictions are available.
    3 View Details [266..323] MSA 3.202993 View MSA. No confident structure predictions are available.
    4 View Details [324..626] FFAS03 1.22 No description for 2qb5A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle