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Protein Overview: CG1942-PA

General Information:
Name(s) found: CG1942-PA / FBpp0088002 [FlyBase]
Description(s) found:
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  • gi|7304165|gb|AAF59201.1| CG1942 [Drosophila melanogaster] [NCBI NR]
  • gi|19921764|ref|NP_610318.1| CG1942 [Drosophila melanogaster] [NCBI NR]
  • gi|17861692|gb|AAL39323.1| GH22719p [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG1942 (CG1942, FBgn0033215). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:3600128..3601695. It has the cytological map location 43E12. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: transferase activity, transferring acyl groups other than amino-acyl groups. It is reported to be involved in the biological process</span>: mesoderm development. 4 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG1942-PA translation from_gene[CG1942 CG1942 FBgn0033215] seq_release:3 mol_weight=39857 cds_boundaries:(2R:2,773,663..2,775,018[+]) aa_length:352 transcript_info:[CG1942-RA seq_release:3] gene_info:[gene symbol:CG1942 FBgn0033215 gene_boundaries:(2R [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9V4R4) CG1942 protein (GH22719p) [DrosMelano7227.FASTAC.txt]
  • (AE003840) CG1942 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG1942-PA [Drosophila melanogaster]gi|17861692|gb|AAL39323.1| GH22719p [Drosophila melanogaster]gi|19921764|ref|NP_610318.1| CG1942-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:join(3600267..3600395,3600456..3600553,3600612..3600743,3600810..3601151,3601209..3601408,3601468..3601625); ID=FBpp0088002; name=CG1942-PA; parent=FBgn0033215,FBtr0088928; dbxref=FlyBase:FBpp0088002,FlyBase_Annotation_IDs:CG1942-PA,G [fly-100309-contam.fasta]
  • GH22719p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG1942-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2R:join(3600267..3600395,3600456..3600553,3600612..3600743,3600810..3601151,3601209..3601408,3601468..3601625); ID=FBpp0088002; name=CG1942-PA; parent=FBgn0033215,FBtr0088928; dbxref=FlyBase:FBpp0088002,FlyBase_Annotation_IDs:CG1942-PA,GB_protein:AAF59201.1,REFSEQ:NP_610318,GB_protein:AAF59201; MD5=6073ff8282428401c1c817abe8214763; length=352; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:join(3600267..3600395,3600456..3600553,3600612..3600743,3600810..3601151,3601209..3601408,3601468..3601625); ID=FBpp0088002; name=CG1942-PA; parent=FBgn0033215,FBtr0088928; dbxref=FlyBase:FBpp0088002,FlyBase_Annotation_IDs:CG1942-PA,GB_protein:AAF59201.1,REFSEQ:NP_610318,GB_protein:AAF59201; MD5=6073ff8282428401c1c817abe8214763; length=352; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG1942 OS=Drosophila melanogaster GN=CG1942 PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2R:join(3600267..3600395,3600456..3600553,3600612..3600743,3600810..3601151,3601209..3601408,3601468..3601625); ID=FBpp0088002; name=CG1942-PA; parent=FBgn0033215,FBtr0088928; dbxref=FlyBase:FBpp0088002,FlyBase_Annotation_IDs:CG1942-PA,GB_protein:AAF59201.1,REFSEQ:NP_610318,GB_protein:AAF59201,FlyMine:FBpp0088002,modMine:FBpp0088002; MD5=6073ff8282428401c1c817abe8214763; length=352; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:join(7712762..7712890,7712951..7713048,7713107..7713238,7713305..7713646,7713704..7713903,7713963..7714120); ID=FBpp0088002; name=CG1942-PA; parent=FBgn0033215,FBtr0088928; dbxref=FlyBase:FBpp0088002,FlyBase_Annotation_IDs:CG1942-PA,GB_protein:AAF59201.1,REFSEQ:NP_610318,GB_protein:AAF59201,FlyMine:FBpp0088002,modMine:FBpp0088002; MD5=6073ff8282428401c1c817abe8214763; length=352; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:join(7712762..7712890,7712951..7713048,7713107..7713238,7713305..7713646,7713704..7713903,7713963..7714120); ID=FBpp0088002; name=CG1942-PA; parent=FBgn0033215,FBtr0088928; dbxref=FlyBase:FBpp0088002,FlyBase_Annotation_IDs:CG1942-PA,GB_protein:AAF59201.1,REFSEQ:NP_610318,GB_protein:AAF59201,FlyMine:FBpp0088002,modMine:FBpp0088002; MD5=6073ff8282428401c1c817abe8214763; length=352; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • CG1942 OS=Drosophila melanogaster GN=CG1942 PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0088002 type=protein; loc=2R:join(7712762..7712890,7712951..7713048,7713107..7713238,7713305..7713646,7713704..7713903,7713963..7714120); ID=FBpp0088002; name=CG1942-PA; parent=FBgn0033215,FBtr0088928; dbxref=FlyBase:FBpp0088002,FlyBase_Annotation_IDs:CG1942-PA,GB_protein:AAF59201.1,REFSEQ:NP_610318,GB_protein:AAF59201,FlyMine:FBpp0088002,modMine:FBpp0088002; MD5=6073ff8282428401c1c817abe8214763; length=352; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:join(7712762..7712890,7712951..7713048,7713107..7713238,7713305..7713646,7713704..7713903,7713963..7714120); ID=FBpp0088002; name=CG1942-PA; parent=FBgn0033215,FBtr0088928; dbxref=FlyBase:FBpp0088002,FlyBase_Annotation_IDs:CG1942-PA,GB_protein:AAF59201.1,REFSEQ:NP_610318,GB_protein:AAF59201,UniProt/TrEMBL:Q7K1C2,FlyMine:FBpp0088002,modMine:FBpp0088002; MD5=6073ff8282428401c1c817abe8214763; length=352; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 352 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: mesoderm development [NAS]
    Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIEWAPLRV PLERRLQILV TAFFTSMLLI LLSVSFLLVA GSLIYGGLLV RSLMVTYLAY  60
   61 VFVHHKKTQS VVDGNGWMIT RTNLLHRHYR DYFPVELVKT AELPATKNYI LASFPHGILG 120
  121 TGIGINMGLE ISKWLELFPQ VRPKLGTLDQ HFHVPFMREV LRCWGLVSVS KEALIRMLSK 180
  181 SNDPKHKDNR DGFTSNAVAI LVGGAQEAMD SHPGQYILTL KNRKGFVRMA IRTGSSIVPS 240
  241 FSFGEVDIFD QVANPPNSLL RRFQDFVKKL TGVSPLIPVG RGFFNYTFGF LPFRRRIVQV 300
  301 VGAPIDVVKN EHPDSEYVDK VHGQVIESLE KLFDQYKDKY LENSKSATLV VH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..352] FFAS03 3.06 Glycerol-3-phosphate (1)-acyltransferase


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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