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Protein Overview: gi|22024065, gi|...

General Information:
Name(s) found: gi|22024065 [NCBI NR]
gi|21645603 [NCBI NR]
Description(s) found:
Found 6 descriptions.
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  • gi|22024065|ref|NP_610316.2| CG1399-PB, isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|21645603|gb|AAF59205.2| CG1399-PB, isoform B [Drosophila melanogaster] [NCBI NR]
    • Organism: Drosophila melanogaster
    Length: 1399 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSICPIPLL IPARHVFTPV RVYLLSAKVP TKIECHFHYL DIVGVESKKS THFSIVTNDR  60
   61 PYSFVTTGDA GNFSSNADVI LTDLASAIKQ IFPTVPLKYI IRKIDIQPPE RETIFSEEFR 120
  121 PSDPRNVGPC GGFSAQYACM CDFHGVPYRE EVAWDVDTIY LSHDTRVLNL RDFDHLEPKD 180
  181 LMAIVSALEY NTFFRGLKAA HMRLSHETLE RILHVLKRSM WLEELHLEAL GLRWDFLNKL 240
  241 SISVITNSNP AIRTIDLSHN IIEDKGAIHL AGPIAKVSKG LCKLALAHCG LTSKGVNQMS 300
  301 HSLTLNQSIS NSLTYLDLSG NSLKDDITNL HNFLAQPNVL EHLDLASTDI TLENLFGALL 360
  361 RGCATHLAHL NVSHNSFSTK KGKEIPPSFK QFFTSTFSLK HLNIAGCKLP MEALKNLLLG 420
  421 LACNESTAGL YLDLSSNTLG AQGAHVLESC IHGVRVLQSL DISDNNLDAE LAPVLTAISK 480
  481 NPSIRTLHLT RSLTGMKPKH IPPVMDALVN LIQKDDFPLV ELVLSENKLK HDLHDFINAL 540
  541 GSNQSLQKLD ISGNFMGDVG ARLLAKALQI NNRLRTIYMD KNGVTLQGYA DIVYALEHNH 600
  601 SMRTIPFPVF DIAPHLKSHP DKTDAVMRKM QELLQRNCNG LKRATGQGFR LQHGFMLSST 660
  661 HQLVDKLVAE TQDTISLAKG GSESASAVQR LITDAENCKQ LMPKLQEAVR NESHPIEMKM 720
  721 TRVASELSYT IKSYLEETME TMMRTGIEQC PKTLGNQIVV QDLRKALAER LVVPEEFLQI 780
  781 CLLNNAGSEI MNKVGEIEQS LAAAISDRAT DEVLEALTRY RRGMGIAESP SVLLDEPQTP 840
  841 DIVRSRSSHD ADGLIIRPGG RGSILPKLGL ESPTATPHLP TKRRSLAKKV RPQSVVENLS 900
  901 LGHFPDLLES PSSHRSNSQL SARAAAGAAA LVGAANMTDS IAVDDGGVDE CCDSITELPS 960
  961 ASFQLQHLVK GRPKRAKTRA PTRPLVTTEC AGGSREIGEG LEHFFRPGSV TPTTLTPLVS1020
 1021 PTSEECSSLS FVDSPTMSRD GNGHMTSEET TPILEERRPI KLERQSPLLK SASWATRSRS1080
 1081 TDNLEKYSPL VGRKSPLVKM RTEGGPGSGS ATGAEETSMP SSNLLKATAR EDKTRSPSSD1140
 1141 SIKSHAAGEG SVIVKTGNGI LRTPIVLQKP RPWSVVGSEP KAGGDLITGN GNADSSKTTP1200
 1201 DKLEEDDVEI VTFGNTCSGS IVGITPGIAL STSGGGSIVG ITPGGALEKK SVRELAAGLN1260
 1261 RMELPLKPPV MPRTLLNATS VRTSTSSTGS TSNSVSVSSS TNANTSMTVL NQSQTRSRIV1320
 1321 SSTSSTDSTE TITERSTTST SSSSSSSYEK QHAKACANLI SNEILSMRNG QLGAKSGSCA1380
 1381 ESGGVKRIAG KEISTLFEV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..165] PSI-BLAST 35.045757 No description for 2omxA was found.
    2 View Details [166..834] PSI-BLAST 43.69897 Human Toll-like Receptor 3 extracellular domain structure
    3 View Details [835..918] deduced N/A No confident structure predictions are available.
    4 View Details [919..1399] PSI-BLAST 16.0 No description for 1y0fA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle