| Protein: | gi|22024065, gi|... |
| Organism: | Drosophila melanogaster |
| Length: | 1399 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|22024065, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
558.0 | [0..13] | [1383..44] |
|
Region A: Residues: [1-165] |
1 11 21 31 41 51
| | | | | |
1 MVSICPIPLL IPARHVFTPV RVYLLSAKVP TKIECHFHYL DIVGVESKKS THFSIVTNDR 60
61 PYSFVTTGDA GNFSSNADVI LTDLASAIKQ IFPTVPLKYI IRKIDIQPPE RETIFSEEFR 120
121 PSDPRNVGPC GGFSAQYACM CDFHGVPYRE EVAWDVDTIY LSHDT
|
| Detection Method: |  |
| Confidence: | 35.045757 |
| Match: | 2omxA |
| Description: | No description for 2omxA was found. |
|
Region A: Residues: [166-834] |
1 11 21 31 41 51
| | | | | |
1 RVLNLRDFDH LEPKDLMAIV SALEYNTFFR GLKAAHMRLS HETLERILHV LKRSMWLEEL 60
61 HLEALGLRWD FLNKLSISVI TNSNPAIRTI DLSHNIIEDK GAIHLAGPIA KVSKGLCKLA 120
121 LAHCGLTSKG VNQMSHSLTL NQSISNSLTY LDLSGNSLKD DITNLHNFLA QPNVLEHLDL 180
181 ASTDITLENL FGALLRGCAT HLAHLNVSHN SFSTKKGKEI PPSFKQFFTS TFSLKHLNIA 240
241 GCKLPMEALK NLLLGLACNE STAGLYLDLS SNTLGAQGAH VLESCIHGVR VLQSLDISDN 300
301 NLDAELAPVL TAISKNPSIR TLHLTRSLTG MKPKHIPPVM DALVNLIQKD DFPLVELVLS 360
361 ENKLKHDLHD FINALGSNQS LQKLDISGNF MGDVGARLLA KALQINNRLR TIYMDKNGVT 420
421 LQGYADIVYA LEHNHSMRTI PFPVFDIAPH LKSHPDKTDA VMRKMQELLQ RNCNGLKRAT 480
481 GQGFRLQHGF MLSSTHQLVD KLVAETQDTI SLAKGGSESA SAVQRLITDA ENCKQLMPKL 540
541 QEAVRNESHP IEMKMTRVAS ELSYTIKSYL EETMETMMRT GIEQCPKTLG NQIVVQDLRK 600
601 ALAERLVVPE EFLQICLLNN AGSEIMNKVG EIEQSLAAAI SDRATDEVLE ALTRYRRGMG 660
661 IAESPSVLL
|
| Detection Method: | |
| Confidence: | 43.69897 |
| Match: | 1ziwA |
| Description: | Human Toll-like Receptor 3 extracellular domain structure |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [835-918] |
1 11 21 31 41 51
| | | | | |
1 DEPQTPDIVR SRSSHDADGL IIRPGGRGSI LPKLGLESPT ATPHLPTKRR SLAKKVRPQS 60
61 VVENLSLGHF PDLLESPSSH RSNS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [919-1399] |
1 11 21 31 41 51
| | | | | |
1 QLSARAAAGA AALVGAANMT DSIAVDDGGV DECCDSITEL PSASFQLQHL VKGRPKRAKT 60
61 RAPTRPLVTT ECAGGSREIG EGLEHFFRPG SVTPTTLTPL VSPTSEECSS LSFVDSPTMS 120
121 RDGNGHMTSE ETTPILEERR PIKLERQSPL LKSASWATRS RSTDNLEKYS PLVGRKSPLV 180
181 KMRTEGGPGS GSATGAEETS MPSSNLLKAT AREDKTRSPS SDSIKSHAAG EGSVIVKTGN 240
241 GILRTPIVLQ KPRPWSVVGS EPKAGGDLIT GNGNADSSKT TPDKLEEDDV EIVTFGNTCS 300
301 GSIVGITPGI ALSTSGGGSI VGITPGGALE KKSVRELAAG LNRMELPLKP PVMPRTLLNA 360
361 TSVRTSTSST GSTSNSVSVS SSTNANTSMT VLNQSQTRSR IVSSTSSTDS TETITERSTT 420
421 STSSSSSSSY EKQHAKACAN LISNEILSMR NGQLGAKSGS CAESGGVKRI AGKEISTLFE 480
481 V
|
| Detection Method: | |
| Confidence: | 16.0 |
| Match: | 1y0fA |
| Description: | No description for 1y0fA was found. |
