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Protein Overview: FBpp0297789, FBp...

General Information:
Name(s) found: FBpp0297789 [FlyBase]
FBpp0297785 [FlyBase]
Description(s) found:
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  • gi|28573291|ref|NP_788280.1| CG30492, isoform C [Drosophila melanogaster] [NCBI NR]
  • gi|28381084|gb|AAO41495.1| CG30492, isoform C [Drosophila melanogaster] [NCBI NR]
  • type=protein; loc=2R:join(3514430..3514677,3521721..3521819,3522264..3522505,3522559..3522705,3526103..3526410,3527209..3527376,3527436..3527556,3527622..3528122,3535802..3536015,3536088..3536202,3537816..3538313,3538367..3538507,3538574..3538713,3538774..3538894); ID=FBpp0297789; name=CG43340-PH; parent=FBgn0263077,FBtr0306936; dbxref=FlyBase:FBpp0297789,FlyBase_Annotation_IDs:CG43340-PH,REFSEQ:NP_001246185,GB_protein:AFH07940; MD5=628167f82bc9c209c7e5dadc87be5139; length=1020; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=2R:join(3514430..3514677,3521721..3521819,3522264..3522505,3522559..3522705,3526103..3526410,3527209..3527376,3527436..3527556,3527622..3528122,3535802..3536015,3536088..3536202,3537816..3538313,3538367..3538507,3538574..3538713,3538774..3538894); ID=FBpp0297785; name=CG43340-PD; parent=FBgn0263077,FBtr0306932; dbxref=FlyBase:FBpp0297785,FlyBase:FBpp0087989,FlyBase_Annotation_IDs:CG30492-PC,FlyBase_Annotation_IDs:CG43340-PD,REFSEQ:NP_788280,GB_protein:AAO41495; MD5=628167f82bc9c209c7e5dadc87be5139; length=1020; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG30492 (CG30492, FBgn0050492). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:3510749..3539292. It has the cytological map location 43E5-43E7. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: zinc ion binding. There is experimental evidence that it is involved in the biological process</span>: inter-male aggressive behavior. 6 alleles are reported. No phenotypic data is available. It has 6 annotated transcripts and 6 annotated polypeptides. [FlyBase]
  • >CG30492-PC translation from_gene[CG30492 CG30492 FBgn0050492] seq_release:3 mol_weight=111682 cds_boundaries:(2R:2,687,826..2,712,287[+]) aa_length:1020 transcript_info:[CG30492-RC seq_release:3] gene_info:[gene symbol:CG30492 synonyms:[CG17983 CG1798 [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q86BC0) CG30492-PC [DrosMelano7227.FASTAC.txt]
  • CG30492-PC, isoform C [Drosophila melanogaster]gi|28573291|ref|NP_788280.1| CG30492-PC [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:join(3514430..3514677,3521721..3521819,3522264..3522505,3522559..3522705,3526103..3526410,3527209..3527376,3527436..3527556,3527622..3528122,3535802..3536015,3536088..3536202,3537816..3538313,3538367..3538507,3538574..3538713,3538774. [fly-100309-contam.fasta]
  • CG30492-PC, isoform C [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2R:join(3514430..3514677,3521721..3521819,3522264..3522505,3522559..3522705,3526103..3526410,3527209..3527376,3527436..3527556,3527622..3528122,3535802..3536015,3536088..3536202,3537816..3538313,3538367..3538507,3538574..3538713,3538774..3538894); ID=FBpp0087989; name=CG30492-PC; parent=FBgn0050492,FBtr0088915; dbxref=FlyBase:FBpp0087989,FlyBase_Annotation_IDs:CG30492-PC,GB_protein:AAO41495.1,REFSEQ:NP_788280,GB_protein:AAO41495; MD5=628167f82bc9c209c7e5dadc87be5139; length=1020; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:join(3514430..3514677,3521721..3521819,3522264..3522505,3522559..3522705,3526103..3526410,3527209..3527376,3527436..3527556,3527622..3528122,3535802..3536015,3536088..3536202,3537816..3538313,3538367..3538507,3538574..3538713,3538774..3538894); ID=FBpp0087989; name=CG30492-PC; parent=FBgn0050492,FBtr0088915; dbxref=FlyBase:FBpp0087989,FlyBase_Annotation_IDs:CG30492-PC,GB_protein:AAO41495.1,REFSEQ:NP_788280,GB_protein:AAO41495; MD5=628167f82bc9c209c7e5dadc87be5139; length=1020; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG30492, isoform C OS=Drosophila melanogaster GN=CG30492 PE=4 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2R:join(3514430..3514677,3521721..3521819,3522264..3522505,3522559..3522705,3526103..3526410,3527209..3527376,3527436..3527556,3527622..3528122,3535802..3536015,3536088..3536202,3537816..3538313,3538367..3538507,3538574..3538713,3538774..3538894); ID=FBpp0297789; name=CG43340-PH; parent=FBgn0263077,FBtr0306936; dbxref=FlyBase:FBpp0297789,FlyBase_Annotation_IDs:CG43340-PH,REFSEQ:NP_001246185,GB_protein:AFH07940; MD5=628167f82bc9c209c7e5dadc87be5139; length=1020; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:join(3514430..3514677,3521721..3521819,3522264..3522505,3522559..3522705,3526103..3526410,3527209..3527376,3527436..3527556,3527622..3528122,3535802..3536015,3536088..3536202,3537816..3538313,3538367..3538507,3538574..3538713,3538774..3538894); ID=FBpp0297785; name=CG43340-PD; parent=FBgn0263077,FBtr0306932; dbxref=FlyBase:FBpp0297785,FlyBase:FBpp0087989,FlyBase_Annotation_IDs:CG30492-PC,FlyBase_Annotation_IDs:CG43340-PD,REFSEQ:NP_788280,GB_protein:AAO41495; MD5=628167f82bc9c209c7e5dadc87be5139; length=1020; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:join(7626925..7627172,7634216..7634314,7634759..7635000,7635054..7635200,7638598..7638905,7639704..7639871,7639931..7640051,7640117..7640617,7648297..7648510,7648583..7648697,7650311..7650808,7650862..7651002,7651069..7651208,7651269..7651389); ID=FBpp0297789; name=CG43340-PH; parent=FBgn0263077,FBtr0306936; dbxref=FlyBase:FBpp0297789,FlyBase_Annotation_IDs:CG43340-PH,REFSEQ:NP_001246185,GB_protein:AFH07940; MD5=628167f82bc9c209c7e5dadc87be5139; length=1020; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:join(7626925..7627172,7634216..7634314,7634759..7635000,7635054..7635200,7638598..7638905,7639704..7639871,7639931..7640051,7640117..7640617,7648297..7648510,7648583..7648697,7650311..7650808,7650862..7651002,7651069..7651208,7651269..7651389); ID=FBpp0297785; name=CG43340-PD; parent=FBgn0263077,FBtr0306932; dbxref=FlyBase:FBpp0297785,FlyBase:FBpp0087989,FlyBase_Annotation_IDs:CG30492-PC,FlyBase_Annotation_IDs:CG43340-PD,REFSEQ:NP_788280,GB_protein:AAO41495; MD5=628167f82bc9c209c7e5dadc87be5139; length=1020; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:join(7626925..7627172,7634216..7634314,7634759..7635000,7635054..7635200,7638598..7638905,7639704..7639871,7639931..7640051,7640117..7640617,7648297..7648510,7648583..7648697,7650311..7650808,7650862..7651002,7651069..7651208,7651269..7651389); ID=FBpp0297789; name=CG43340-PH; parent=FBgn0263077,FBtr0306936; dbxref=FlyBase:FBpp0297789,FlyBase_Annotation_IDs:CG43340-PH,REFSEQ:NP_001246185,GB_protein:AFH07940; MD5=628167f82bc9c209c7e5dadc87be5139; length=1020; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=2R:join(7626925..7627172,7634216..7634314,7634759..7635000,7635054..7635200,7638598..7638905,7639704..7639871,7639931..7640051,7640117..7640617,7648297..7648510,7648583..7648697,7650311..7650808,7650862..7651002,7651069..7651208,7651269..7651389); ID=FBpp0297785; name=CG43340-PD; parent=FBgn0263077,FBtr0306932; dbxref=FlyBase:FBpp0297785,FlyBase:FBpp0087989,FlyBase_Annotation_IDs:CG30492-PC,FlyBase_Annotation_IDs:CG43340-PD,REFSEQ:NP_788280,GB_protein:AAO41495; MD5=628167f82bc9c209c7e5dadc87be5139; length=1020; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Isoform of A0A0B4K7U0, CG43340, isoform D OS=Drosophila melanogaster GN=CG43340 PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0297789 type=protein; loc=2R:join(7626925..7627172,7634216..7634314,7634759..7635000,7635054..7635200,7638598..7638905,7639704..7639871,7639931..7640051,7640117..7640617,7648297..7648510,7648583..7648697,7650311..7650808,7650862..7651002,7651069..7651208,7651269..7651389); ID=FBpp0297789; name=CG43340-PH; parent=FBgn0263077,FBtr0306936; dbxref=FlyBase:FBpp0297789,FlyBase_Annotation_IDs:CG43340-PH,REFSEQ:NP_001246185,GB_protein:AFH07940; MD5=628167f82bc9c209c7e5dadc87be5139; length=1020; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0297785 type=protein; loc=2R:join(7626925..7627172,7634216..7634314,7634759..7635000,7635054..7635200,7638598..7638905,7639704..7639871,7639931..7640051,7640117..7640617,7648297..7648510,7648583..7648697,7650311..7650808,7650862..7651002,7651069..7651208,7651269..7651389); ID=FBpp0297785; name=CG43340-PD; parent=FBgn0263077,FBtr0306932; dbxref=FlyBase:FBpp0297785,FlyBase:FBpp0087989,FlyBase_Annotation_IDs:CG30492-PC,FlyBase_Annotation_IDs:CG43340-PD,REFSEQ:NP_788280,GB_protein:AAO41495; MD5=628167f82bc9c209c7e5dadc87be5139; length=1020; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:join(7626925..7627172,7634216..7634314,7634759..7635000,7635054..7635200,7638598..7638905,7639704..7639871,7639931..7640051,7640117..7640617,7648297..7648510,7648583..7648697,7650311..7650808,7650862..7651002,7651069..7651208,7651269..7651389); ID=FBpp0297789; name=CG43340-PH; parent=FBgn0263077,FBtr0306936; dbxref=FlyBase:FBpp0297789,FlyBase_Annotation_IDs:CG43340-PH,REFSEQ:NP_001246185,GB_protein:AFH07940,UniProt/TrEMBL:A1Z718; MD5=628167f82bc9c209c7e5dadc87be5139; length=1020; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=2R:join(7626925..7627172,7634216..7634314,7634759..7635000,7635054..7635200,7638598..7638905,7639704..7639871,7639931..7640051,7640117..7640617,7648297..7648510,7648583..7648697,7650311..7650808,7650862..7651002,7651069..7651208,7651269..7651389); ID=FBpp0297785; name=CG43340-PD; parent=FBgn0263077,FBtr0306932; dbxref=FlyBase:FBpp0297785,FlyBase:FBpp0087989,FlyBase_Annotation_IDs:CG30492-PC,FlyBase_Annotation_IDs:CG43340-PD,REFSEQ:NP_788280,GB_protein:AAO41495,UniProt/TrEMBL:A1Z718; MD5=628167f82bc9c209c7e5dadc87be5139; length=1020; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 1020 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: inter-male aggressive behavior [IMP]
    Molecular Function: zinc ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGEVPAETS PVGCNTSNSQ GSSPHPDPIQ QQQLNSSVDS GIAVLEAESP TLRRRQRLHQ  60
   61 CQRILQVLQR DQLTHQQLRD RLSKLANKKW RKEESSSEDH ACNVCCADLD LSSAKNYVTC 120
  121 CTCEKSVCRG PKCADWRPKD AKWECQLCQS SKESLAHTSS WVAEQMSFNQ HKFVYPMRAR 180
  181 SEVYIPIVGD GNDSSMQFES VSQIGQNAHM DERAKIREYV EEIVAEMLGG NLDHVKVGQL 240
  241 SKSENYLPAI VNGHTNNSNN NNNNNHADSE LADLSQTRLR SLIETIIAET LRSSTLSASG 300
  301 AVSEISLDTR SHVSDLANGN GLKRRHRTEH YFEPKIYQDL LATAVLNKIV DKEGNTRLAA 360
  361 ESTPDLSGRH IDENFNAEAL STTSGSSIEP RSDCSLTDHE IGLDNGKSQS LQTDLERESV 420
  421 LSDYIAAHMV PLPDFSASVT ESEDDIGSIS SGMIGDGNWE DNWLFKKKRS SATPSSIGML 480
  481 VPAPRENVRA QIGDKTTDEV SDLSEIGSDI EESSLDLLRC NDLNDRLLSK HLIGGQNTKM 540
  541 VLDELVDRTS LTSHTLPEEN EPAFTETTNE FVVSPMAMPS DIKAPSPTPP PPPMIFQDDL 600
  601 LNEEPDHTPI AGSIAEREVK KWYNAVEMPN NPYSPEALKQ RISGTQERYM DVPNISPSAE 660
  661 QKALASALTE NPDPPAPKAD YKRYSRDYYI NNAPTSTDST GGGKAATTSA GEDVEDIVIN 720
  721 EARKASQTAT EQNPPQESIS VYKATPVQVL DESLDSQSNP SLYSLQTTTT NTSDESDTVR 780
  781 IYDFNKQETT VIRAAPAEQQ PSESTTSSME SAQGAPPSVS SSIDSSVSQK RERPVVLQFG 840
  841 PGDSVPTIGS PASTPTRGST PPAFRFLQPK RRLIDPSQVL SVDEDDVPEP TTPAAEKPVI 900
  901 EDEVAHSMPS VKALAQAFLL TSKHTQPQRR WRAKVRIAAP PDTPDKPNTS LAKRHKLEHA 960
  961 VSMAEVADES TIASDLSSLE TDPSIHSEAT PPIASPASPV PVRHGFLRSN IAFFENLKFK1020
 1021

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..186] PSI-BLAST 50.69897 Effector domain of rabphilin-3a
    2 View Details [187..367] MSA 1.122991 View MSA. No confident structure predictions are available.
    3 View Details [368..473] deduced N/A No confident structure predictions are available.
    4 View Details [474..661] MSA 2.152981 View MSA. No confident structure predictions are available.
    5 View Details [662..772] deduced N/A No confident structure predictions are available.
    6 View Details [773..900] MSA 1.148981 View MSA. No confident structure predictions are available.
    7 View Details [901..1020] MSA 1.124981 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.24093737575291 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.
    7 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle