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Protein Overview: scra-PB

General Information:
Name(s) found: scra-PB / FBpp0087986 [FlyBase]
Description(s) found:
Found 22 descriptions.
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  • The gene scraps is referred to in FlyBase by the symbol Dmel\scra (CG2092, FBgn0261385). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:3477624..3482759. It has the cytological map location 43E4-43E6. There is experimental evidence that it has the molecular function</span>: actin binding; microtubule binding. There is experimental evidence that it is involved in the biological process</span>: sensory organ development; septin ring organization; positive regulation of NFAT protein import into nucleus; cytokinesis; sensory organ precursor cell division; cellularization; plasma membrane organization; asymmetric cell division. 28 alleles are reported. The phenotypes of these alleles are annotated with: scolopidial sheath cell; actomyosin contractile ring; mitotic telophase; scolopidium; abdominal lch5 neuron; scolopidial ligament cell; scolopale; embryonic peripheral nervous system; embryonic central nervous system; ventral multidendritic neuron. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 1239 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    germline ring canal [TAS]
    actomyosin contractile ring [NAS]
    cytoplasm [IDA]
    Biological Process: positive regulation of NFAT protein import into nucleus [IMP]
    plasma membrane organization [IMP]
    sensory organ precursor cell division [IMP]
    cytokinesis [IMP][TAS]
    asymmetric cell division [IMP]
    cellularization [IMP][TAS]
    septin ring organization [IMP]
    sensory organ development [IMP]
    Molecular Function: actin binding [IDA][ISS][NAS]
    microtubule binding [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPFTQHMLE KAEQRSRALG ISNASKFPLV ECSVPSSSAT SASGGDAGVL APRSRSPGGQ  60
   61 SAASGGGKVV TLGKATLEAS PAKPLRHYTA VNKENLDMGI EINITTDKPI GVQVEIQEQE 120
  121 VTDDEEQAEG GALNPLLEAE PVNQPLARLR DTSRSRLQRM GALYSNTDDL SSPIHRTEGQ 180
  181 FHVTTGEEED CGNRSSRQPK QRLGKLAALA DTINQWEDDT SHHEVHRLLE APPPKPHLSS 240
  241 RRAEKGPAPL PPKKDEVDEA SRTKQLKWDP KVLSSLEAQG FQRRESSTIK HTYDYAKQEE 300
  301 AAPASKVEDA VLTAKPPVPQ KSTTVSQVAK NFASSAPAPK PAPAPAVSVK SGLVSGRAAL 360
  361 FENKGTGGQS QGLRNQKDPC ELSLKERMKL FETGNNKAML PMAPIGSAPS ITQIRAEEVK 420
  421 QHLAAMHPVT AAAATTVVAA TKPKQENKLR DKVAALVANA QSSAETRIKD IDRQRQEDMQ 480
  481 IISNRFNKQK ELFDNQPSDS SVAAQARPPA PAPSRVVRPM PPPPPPPIAA LSPGLASSKR 540
  541 RSPGDAPTTD EDSKRARKSH SDRLYPALSD LDSSGDNCCA AETASATDDS HQQDEEETES 600
  601 CMDESDDQSQ TEDSSAGMCN GSLGREIMSA VQRNEVEMQQ QQTGKKTVRY ADQDMYYDDS 660
  661 SLNSSQVSAG IDDYLDEALV EDYGSTQDDQ SDSGDEQNAS RLSLGSKGTT ASNSFSFRKN 720
  721 PASICTPIEE HHEMEMDLQT PLLSGAQPVK SELSVNQDND NLVTLVHTVS FYRRQQSANS 780
  781 SNSTPVRKIC REQQVMRSAL AGDCHAKHRL EYDSPQQSDY VAAATDIADQ TDEDDEEMQN 840
  841 AREVNDASQA QDKIKKLLSE VCKQQQVIGQ ASQALNLCAA TVEFSGSTES VEGERYLLLA 900
  901 THRRQACLDE VQRLRVENSI RPVGAPKEKG LLTVKDITIP LRQEYVRKMA SNNINGHHLV 960
  961 CLLKYNEHVL ATKTVPTMPG LLSVKFPDVL QLNNVYADFR ITLEIYGMLA QRDQLPHELK1020
 1021 YHINLNKKGG IKTPKKKGGE NRLVMPPVQS PAGPHVVRTP QLVQYGFAIF SLREIQRTTW1080
 1081 TLTQVLGVSP LEGVVHMKVN CELSVSVEYK GFLTMFEDIS GFGAWHRRWC YLNGSVINYW1140
 1141 KYPDDEKRKT PMGSIDLNSC TSQKVTTAPR DICARLNTML LECERPALET DQESLIIVPN1200
 1201 GRTTTVRHLL SADTKEEREE WCAYLNKALT LLRAWGTTH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..191] MSA 2.227995 View MSA. No confident structure predictions are available.
    2 View Details [192..307] deduced N/A No confident structure predictions are available.
    3 View Details [308..389] MSA 2.235995 View MSA. No confident structure predictions are available.
    4 View Details [390..491] deduced N/A No confident structure predictions are available.
    5 View Details [492..711] deduced N/A No confident structure predictions are available.
    6 View Details [712..941] deduced N/A No confident structure predictions are available.
    7 View Details [942..1039] deduced N/A No confident structure predictions are available.
    8 View Details [1040..1239] PSI-BLAST 25.522879 No description for 2yryA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle