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Protein Overview: scra-PA

General Information:
Name(s) found: scra-PA / FBpp0087985 [FlyBase]
Description(s) found:
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  • gi|24586313|ref|NP_724583.1| scraps, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|21645592|gb|AAM71099.1| scraps, isoform A [Drosophila melanogaster] [NCBI NR]
  • The gene scraps is referred to in FlyBase by the symbol Dmel\scra (CG2092, FBgn0261385). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:3477624..3482759. It has the cytological map location 43E4-43E6. There is experimental evidence that it has the molecular function</span>: actin binding; microtubule binding. There is experimental evidence that it is involved in the biological process</span>: sensory organ development; septin ring organization; positive regulation of NFAT protein import into nucleus; cytokinesis; sensory organ precursor cell division; cellularization; plasma membrane organization; asymmetric cell division. 28 alleles are reported. The phenotypes of these alleles are annotated with: scolopidial sheath cell; actomyosin contractile ring; mitotic telophase; scolopidium; abdominal lch5 neuron; scolopidial ligament cell; scolopale; embryonic peripheral nervous system; embryonic central nervous system; ventral multidendritic neuron. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
  • >CG2092-PA translation from_gene[CG2092 scra FBgn0004243] seq_release:3 mol_weight=132909 cds_boundaries:(2R:2,651,345..2,655,874[+]) aa_length:1212 transcript_info:[CG2092-RA seq_release:3] gene_info:[gene symbol:scra FBgn0004243 gene_boundaries:(2R:2 [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q8MKN2) CG2092-PA [DrosMelano7227.FASTAC.txt]
  • CG2092-PA, isoform A [Drosophila melanogaster]gi|24586313|ref|NP_724583.1| CG2092-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:join(3477949..3477966,3478073..3478387,3478451..3478930,3479012..3479378,3479443..3479808,3479867..3480038,3480200..3480338,3480406..3480582,3480644..3480865,3480923..3481286,3481400..3481698,3481762..3482481); ID=FBpp0087985; name=sc [fly-100309-contam.fasta]
  • scraps CG2092-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG2092-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2R:join(3477949..3477966,3478073..3478387,3478451..3478930,3479012..3479378,3479443..3479808,3479867..3480038,3480200..3480338,3480406..3480582,3480644..3480865,3480923..3481286,3481400..3481698,3481762..3482481); ID=FBpp0087985; name=scra-PA; parent=FBgn0004243,FBtr0088911; dbxref=FlyBase_Annotation_IDs:CG2092-PA,FlyBase:FBpp0087985,GB_protein:AAM71099.1,REFSEQ:NP_724583,GB_protein:AAM71099; MD5=7d52c127ff9d6f407674236a4726bd4b; length=1212; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:join(3477949..3477966,3478073..3478387,3478451..3478930,3479012..3479378,3479443..3479808,3479867..3480038,3480200..3480338,3480406..3480582,3480644..3480865,3480923..3481286,3481400..3481698,3481762..3482481); ID=FBpp0087985; name=scra-PA; parent=FBgn0004243,FBtr0088911; dbxref=FlyBase_Annotation_IDs:CG2092-PA,FlyBase:FBpp0087985,GB_protein:AAM71099.1,REFSEQ:NP_724583,GB_protein:AAM71099; MD5=7d52c127ff9d6f407674236a4726bd4b; length=1212; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Isoform A of Actin-binding protein anillin OS=Drosophila melanogaster GN=scra [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2R:join(3477949..3477966,3478073..3478387,3478451..3478930,3479012..3479378,3479443..3479808,3479867..3480038,3480200..3480338,3480406..3480582,3480644..3480865,3480923..3481286,3481400..3481698,3481762..3482481); ID=FBpp0087985; name=scra-PA; parent=FBgn0261385,FBtr0088911; dbxref=FlyBase_Annotation_IDs:CG2092-PA,FlyBase:FBpp0087985,GB_protein:AAM71099.1,REFSEQ:NP_724583,GB_protein:AAM71099,FlyMine:FBpp0087985,modMine:FBpp0087985; MD5=7d52c127ff9d6f407674236a4726bd4b; length=1212; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:join(7590444..7590461,7590568..7590882,7590946..7591425,7591507..7591873,7591938..7592303,7592362..7592533,7592695..7592833,7592901..7593077,7593139..7593360,7593418..7593781,7593895..7594193,7594257..7594976); ID=FBpp0087985; name=scra-PA; parent=FBgn0261385,FBtr0088911; dbxref=FlyBase_Annotation_IDs:CG2092-PA,FlyBase:FBpp0087985,GB_protein:AAM71099.1,REFSEQ:NP_724583,GB_protein:AAM71099,FlyMine:FBpp0087985,modMine:FBpp0087985; MD5=7d52c127ff9d6f407674236a4726bd4b; length=1212; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:join(7590444..7590461,7590568..7590882,7590946..7591425,7591507..7591873,7591938..7592303,7592362..7592533,7592695..7592833,7592901..7593077,7593139..7593360,7593418..7593781,7593895..7594193,7594257..7594976); ID=FBpp0087985; name=scra-PA; parent=FBgn0261385,FBtr0088911; dbxref=FlyBase_Annotation_IDs:CG2092-PA,FlyBase:FBpp0087985,GB_protein:AAM71099.1,REFSEQ:NP_724583,GB_protein:AAM71099,FlyMine:FBpp0087985,modMine:FBpp0087985; MD5=7d52c127ff9d6f407674236a4726bd4b; length=1212; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Isoform of Q9V4P1, Isoform A of Actin-binding protein anillin OS=Drosophila melanogaster GN=scra [DROME.fasta.20160308]
  • FBpp0087985 type=protein; loc=2R:join(7590444..7590461,7590568..7590882,7590946..7591425,7591507..7591873,7591938..7592303,7592362..7592533,7592695..7592833,7592901..7593077,7593139..7593360,7593418..7593781,7593895..7594193,7594257..7594976); ID=FBpp0087985; name=scra-PA; parent=FBgn0261385,FBtr0088911; dbxref=FlyBase_Annotation_IDs:CG2092-PA,FlyBase:FBpp0087985,GB_protein:AAM71099.1,REFSEQ:NP_724583,GB_protein:AAM71099,FlyMine:FBpp0087985,modMine:FBpp0087985; MD5=7d52c127ff9d6f407674236a4726bd4b; length=1212; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:join(7590444..7590461,7590568..7590882,7590946..7591425,7591507..7591873,7591938..7592303,7592362..7592533,7592695..7592833,7592901..7593077,7593139..7593360,7593418..7593781,7593895..7594193,7594257..7594976); ID=FBpp0087985; name=scra-PA; parent=FBgn0261385,FBtr0088911; dbxref=FlyBase_Annotation_IDs:CG2092-PA,FlyBase:FBpp0087985,GB_protein:AAM71099.1,REFSEQ:NP_724583,GB_protein:AAM71099,FlyMine:FBpp0087985,modMine:FBpp0087985; MD5=7d52c127ff9d6f407674236a4726bd4b; length=1212; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 1212 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPFTQHMLE KAEQRSRALG ISNASKFPLV ECSVPSSSAT SASGGDAGVL APRSRSPGGQ  60
   61 SAASGGGKVV TLGKATLEAS PAKPLRHYTA VNKENLDMGI EINITTDKPI GVQVEIQEQE 120
  121 VTDDEEQAEG GALNPLLEAE PVNQPLARLR DTSRSRLQRM GALYSNTDDL SSPIHRTEGQ 180
  181 FHVTTGEEED CGNRSSRQPK QRLGKLAALA DTINQWEDDT SHHEVHRLLE APPPKPHLSS 240
  241 RRAEKGPAPL PPKKDEVDEA SRTKQLKWDP KEEAAPASKV EDAVLTAKPP VPQKSTTVSQ 300
  301 VAKNFASSAP APKPAPAPAV SVKSGLVSGR AALFENKGTG GQSQGLRNQK DPCELSLKER 360
  361 MKLFETGNNK AMLPMAPIGS APSITQIRAE EVKQHLAAMH PVTAAAATTV VAATKPKQEN 420
  421 KLRDKVAALV ANAQSSAETR IKDIDRQRQE DMQIISNRFN KQKELFDNQP SDSSVAAQAR 480
  481 PPAPAPSRVV RPMPPPPPPP IAALSPGLAS SKRRSPGDAP TTDEDSKRAR KSHSDRLYPA 540
  541 LSDLDSSGDN CCAAETASAT DDSHQQDEEE TESCMDESDD QSQTEDSSAG MCNGSLGREI 600
  601 MSAVQRNEVE MQQQQTGKKT VRYADQDMYY DDSSLNSSQV SAGIDDYLDE ALVEDYGSTQ 660
  661 DDQSDSGDEQ NASRLSLGSK GTTASNSFSF RKNPASICTP IEEHHEMEMD LQTPLLSGAQ 720
  721 PVKSELSVNQ DNDNLVTLVH TVSFYRRQQS ANSSNSTPVR KICREQQVMR SALAGDCHAK 780
  781 HRLEYDSPQQ SDYVAAATDI ADQTDEDDEE MQNAREVNDA SQAQDKIKKL LSEVCKQQQV 840
  841 IGQASQALNL CAATVEFSGS TESVEGERYL LLATHRRQAC LDEVQRLRVE NSIRPVGAPK 900
  901 EKGLLTVKDI TIPLRQEYVR KMASNNINGH HLVCLLKYNE HVLATKTVPT MPGLLSVKFP 960
  961 DVLQLNNVYA DFRITLEIYG MLAQRDQLPH ELKYHINLNK KGGIKTPKKK GGENRLVMPP1020
 1021 VQSPAGPHVV RTPQLVQYGF AIFSLREIQR TTWTLTQVLG VSPLEGVVHM KVNCELSVSV1080
 1081 EYKGFLTMFE DISGFGAWHR RWCYLNGSVI NYWKYPDDEK RKTPMGSIDL NSCTSQKVTT1140
 1141 APRDICARLN TMLLECERPA LETDQESLII VPNGRTTTVR HLLSADTKEE REEWCAYLNK1200
 1201 ALTLLRAWGT TH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..81] deduced N/A No confident structure predictions are available.
    2 View Details [82..318] MSA 1.241996 View MSA. No confident structure predictions are available.
    3 View Details [319..378] deduced N/A No confident structure predictions are available.
    4 View Details [379..471] deduced N/A No confident structure predictions are available.
    5 View Details [472..695] deduced N/A No confident structure predictions are available.
    6 View Details [696..911] MSA 1.219997 View MSA. No confident structure predictions are available.
    7 View Details [912..1024] deduced N/A No confident structure predictions are available.
    8 View Details [1025..1212] PSI-BLAST 28.154902 Triglycine variant of the ARNO Pleckstrin Homology Domain in complex with Ins(1,3,4,5)P4


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle