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Protein Overview: p47-PA

General Information:
Name(s) found: p47-PA / FBpp0088069 [FlyBase]
Description(s) found:
Found 22 descriptions.
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  • The gene p47 is referred to in FlyBase by the symbol Dmel\p47 (CG11139, FBgn0033179). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:3352520..3354236. It has the cytological map location 43C3-43C4. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: nuclear envelope reassembly; rhabdomere development. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 407 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: rhabdomere development [IMP]
    nuclear envelope reassembly [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAARGDLIAQ FIEITGTDEN VARFYLSSCD WDIEHALGNY WSTQADLPVP VPTVGHADNP  60
   61 KPKPTSSSGA SASASAAGAT KSADSAVATS SASVDIAPAA TKAKPKFATL SDMSKESSSD 120
  121 DDQQAFYAGG SDRSGQQVLG PPKRKNFREQ LTDMMRSAQE QNIAEVGPST SSGSASGGSG 180
  181 GAVWGQGMRL GMTDNDHTAV GTKKPAATIE NKPVVVLKLW SQGFSIDGGE LRHYDDPQNK 240
  241 EFLETVMRGE IPQELLEMGR MVNVDVEDHR HEDFKRQPVP QTFKGSGQKL GSPVANLVTE 300
  301 APTVPVALSP GEAANQEASA RDAINLNSEA PSTTLQIRLA DGSRLAAQFN LSHTVSDIRR 360
  361 FIQTARPQYS TSNFILVSSF PTRELSDDNS TIEKAGLKNA ALMQRLK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..98] MSA 15.157995 View MSA. No confident structure predictions are available.
    2 View Details [99..179] deduced N/A No confident structure predictions are available.
    3 View Details [180..274] PSI-BLAST 13.0 Solution structure of SEP domain from human p47
    4 View Details [275..407] PSI-BLAST 27.09691 Crystal structure of AAA ATPase p97/VCP ND1 in complex with p47 C

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4
    Term Confidence Notes
  • binding
    		•  1.2991525071751 bayes_pls_golite062009
  • protein binding
    		•  1.17286764835548 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle