| Protein: | p47-PA |
| Organism: | Drosophila melanogaster |
| Length: | 407 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for p47-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
283.0 | [0..1] | [406..1] |
|
Region A: Residues: [1-98] |
1 11 21 31 41 51
| | | | | |
1 MAARGDLIAQ FIEITGTDEN VARFYLSSCD WDIEHALGNY WSTQADLPVP VPTVGHADNP 60
61 KPKPTSSSGA SASASAAGAT KSADSAVATS SASVDIAP
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [99-179] |
1 11 21 31 41 51
| | | | | |
1 AATKAKPKFA TLSDMSKESS SDDDQQAFYA GGSDRSGQQV LGPPKRKNFR EQLTDMMRSA 60
61 QEQNIAEVGP STSSGSASGG S
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [180-274] |
1 11 21 31 41 51
| | | | | |
1 GGAVWGQGMR LGMTDNDHTA VGTKKPAATI ENKPVVVLKL WSQGFSIDGG ELRHYDDPQN 60
61 KEFLETVMRG EIPQELLEMG RMVNVDVEDH RHEDF
|
| Detection Method: | |
| Confidence: | 13.0 |
| Match: | 1ss6A |
| Description: | Solution structure of SEP domain from human p47 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [275-407] |
1 11 21 31 41 51
| | | | | |
1 KRQPVPQTFK GSGQKLGSPV ANLVTEAPTV PVALSPGEAA NQEASARDAI NLNSEAPSTT 60
61 LQIRLADGSR LAAQFNLSHT VSDIRRFIQT ARPQYSTSNF ILVSSFPTRE LSDDNSTIEK 120
121 AGLKNAALMQ RLK
|
| Detection Method: | |
| Confidence: | 27.09691 |
| Match: | 1s3sG |
| Description: | Crystal structure of AAA ATPase p97/VCP ND1 in complex with p47 C |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.2991525071751 | bayes_pls_golite062009 |
| protein binding | 1.17286764835548 | bayes_pls_golite062009 |
