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Protein Overview: koi-PA

General Information:
Name(s) found: koi-PA / FBpp0085492 [FlyBase]
Description(s) found:
Found 11 descriptions.
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  • The gene klaroid is referred to in FlyBase by the symbol Dmel\koi (CG18584, FBgn0033107). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:2702565..2704510. It has the cytological map location 42D4. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: nuclear migration. 9 alleles are reported. The phenotypes of these alleles are annotated with: rhabdomere; eye. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 564 amino acids

    Gene Ontology:
    Cellular Component: nuclear inner membrane [NAS]
    perinuclear region of cytoplasm [IDA]
    Biological Process: nuclear migration [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVPTVRSPQ REAEAIKVNM ASIEQNIQKA LTAEEYENIL NHVNSYVQQL VELKMQQHSK  60
   61 ELAPQQIELF VKLMKENLKQ IMYKTELSEK DLSDLAIKLK LELQSSGGWQ DGAKLSQANL 120
  121 EEITKLIKAE VHLHESHYTI QLDRIDFASL LERILAAPAL ADFVDARISL RVGELEPKES 180
  181 SGSSDAEVQI ERLNREIAFI KLALSDKQAE NADLHQSISN LKLGQEDLLE RIQQHELSQD 240
  241 RRFHGLLAEI ENKLSALNDS QFALLNKQIK LSLVEILGFK QSTAGGSAGQ LDDFDLQTWV 300
  301 RSMFVAKDYL EQQLLELNKR TNNNIRDEIE RSSILLMSDI SQRLKREILL VVEAKHNEST 360
  361 KALKGHIREE EVRQIVKTVL AIYDADKTGL VDFALESAGG QILSTRCTES YQTKSAQISV 420
  421 FGIPLWYPTN TPRVAISPNV QPGECWAFQG FPGFLGKSRL NSLVYVTGFT LEHIPKSLSP 480
  481 TGRIESAPRN FTVWGLEQEK DQEPVLFGDY QFEDNGASLQ YFAVQNLDIK RPYEIVELRI 540
  541 ETNHGHPTYT CLYRFRVHGK PPAT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..371] PSI-BLAST 15.39794 Heavy meromyosin subfragment
    2 View Details [372..564] FFAS03 2.84 X-ray structure of human PP25 gene product, HSPC034. Northeast Structural Genomics Target HR1958.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.83648324420917 bayes_pls_golite062009
  • protein binding
    		•  1.2189246137916 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle