| Protein: | koi-PA |
| Organism: | Drosophila melanogaster |
| Length: | 564 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for koi-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
319.0 | [0..96] | [562..682] |
|
Region A: Residues: [1-371] |
1 11 21 31 41 51
| | | | | |
1 MEVPTVRSPQ REAEAIKVNM ASIEQNIQKA LTAEEYENIL NHVNSYVQQL VELKMQQHSK 60
61 ELAPQQIELF VKLMKENLKQ IMYKTELSEK DLSDLAIKLK LELQSSGGWQ DGAKLSQANL 120
121 EEITKLIKAE VHLHESHYTI QLDRIDFASL LERILAAPAL ADFVDARISL RVGELEPKES 180
181 SGSSDAEVQI ERLNREIAFI KLALSDKQAE NADLHQSISN LKLGQEDLLE RIQQHELSQD 240
241 RRFHGLLAEI ENKLSALNDS QFALLNKQIK LSLVEILGFK QSTAGGSAGQ LDDFDLQTWV 300
301 RSMFVAKDYL EQQLLELNKR TNNNIRDEIE RSSILLMSDI SQRLKREILL VVEAKHNEST 360
361 KALKGHIREE E
|
| Detection Method: |  |
| Confidence: | 15.39794 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [372-564] |
1 11 21 31 41 51
| | | | | |
1 VRQIVKTVLA IYDADKTGLV DFALESAGGQ ILSTRCTESY QTKSAQISVF GIPLWYPTNT 60
61 PRVAISPNVQ PGECWAFQGF PGFLGKSRLN SLVYVTGFTL EHIPKSLSPT GRIESAPRNF 120
121 TVWGLEQEKD QEPVLFGDYQ FEDNGASLQY FAVQNLDIKR PYEIVELRIE TNHGHPTYTC 180
181 LYRFRVHGKP PAT
|
| Detection Method: | |
| Confidence: | 2.84 |
| Match: | 1tvgA |
| Description: | X-ray structure of human PP25 gene product, HSPC034. Northeast Structural Genomics Target HR1958. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.83648324420917 | bayes_pls_golite062009 |
| protein binding | 1.2189246137916 | bayes_pls_golite062009 |
