YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: Or42a-PA

General Information:
Name(s) found: Or42a-PA / FBpp0085388 [FlyBase]
Description(s) found:
Found 21 descriptions.
SHOW ALL
  • The gene Odorant receptor 42a is referred to in FlyBase by the symbol Dmel\Or42a (CG17250, FBgn0033041). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:1679001..1680468. It has the cytological map location 41F11. Based on sequence similarity, it is predicted to have molecular function</span>: olfactory receptor activity. There is experimental evidence that it is involved in the biological process</span>: olfactory behavior; detection of chemical stimulus involved in sensory perception of smell. 4 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 406 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA]
    integral to membrane [ISS]
    Biological Process: sensory perception of smell [ISS]
    detection of chemical stimulus involved in sensory perception of smell [IMP]
    olfactory behavior [IMP]
    Molecular Function: odorant binding [IEA]
    olfactory receptor activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLRRWFPTL YTQSKDSPVR SRDATLYLLR CVFLMGVRKP PAKFFVAYVL WSFALNFCST  60
   61 FYQPIGFLTG YISHLSEFSP GEFLTSLQVA FNAWSCSTKV LIVWALVKRF DEANNLLDEM 120
  121 DRRITDPGER LQIHRAVSLS NRIFFFFMAV YMVYATNTFL SAIFIGRPPY QNYYPFLDWR 180
  181 SSTLHLALQA GLEYFAMAGA CFQDVCVDCY PVNFVLVLRA HMSIFAERLR RLGTYPYESQ 240
  241 EQKYERLVQC IQDHKVILRF VDCLRPVISG TIFVQFLVVG LVLGFTLINI VLFANLGSAI 300
  301 AALSFMAAVL LETTPFCILC NYLTEDCYKL ADALFQSNWI DEEKRYQKTL MYFLQKLQQP 360
  361 ITFMAMNVFP ISVGTNISVT KFSFSVFTLV KQMNISEKLA KSEMEE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..107] MSA 2.342996 View MSA. No confident structure predictions are available.
    2 View Details [108..231] deduced N/A No confident structure predictions are available.
    3 View Details [232..406] MSA 16.391997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle