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Protein Overview: d4-PC

General Information:
Name(s) found: d4-PC / FBpp0085419 [FlyBase]
Description(s) found:
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  • gi|7302246|gb|AAF57339.1| d4, isoform C [Drosophila melanogaster] [NCBI NR]
  • gi|24585823|ref|NP_724404.1| d4, isoform C [Drosophila melanogaster] [NCBI NR]
  • The gene d4 is referred to in FlyBase by the symbol Dmel\d4 (CG2682, FBgn0033015). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:1147484..1183475. It has the cytological map location 41E3-41E4. It is reported to have molecular function</span>: transcription factor activity. There is experimental evidence that it is involved in the biological process</span>: dendrite morphogenesis; muscle organ development. 3 alleles are reported. No phenotypic data is available. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
  • >CG2682-PC translation from_gene[CG2682 d4 FBgn0033015] seq_release:3 mol_weight=55121 cds_boundaries:(2R:433,135..434,761[+]) aa_length:495 transcript_info:[CG2682-RC seq_release:3] gene_info:[gene symbol:d4 FBgn0033015 gene_boundaries:(2R:432,956..43 [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9V9F2) CG2682 protein [DrosMelano7227.FASTAC.txt]
  • (AE003787) CG2682 gene product [alt 2] [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG2682-PC, isoform C [Drosophila melanogaster]gi|24585823|ref|NP_724404.1| CG2682-PC [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:join(1181770..1182217,1182302..1182562,1182621..1183399); ID=FBpp0085419; name=d4-PC; parent=FBgn0033015,FBtr0086083; dbxref=GB_protein:AAF57339.1,FlyBase:FBpp0085419,FlyBase_Annotation_IDs:CG2682-PC,REFSEQ:NP_724404,GB_protein:AAF573 [fly-100309-contam.fasta]
  • CG2682-PC, isoform C [Drosophila melanogaster] [nr-271106-contam.fasta]
  • d4 CG2682-PC, isoform C [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2R:join(1181770..1182217,1182302..1182562,1182621..1183399); ID=FBpp0085419; name=d4-PC; parent=FBgn0033015,FBtr0086083; dbxref=GB_protein:AAF57339.1,FlyBase:FBpp0085419,FlyBase_Annotation_IDs:CG2682-PC,REFSEQ:NP_724404,GB_protein:AAF57339; MD5=5ac0546da810c5332733c9b84b73a501; length=495; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:join(1181770..1182217,1182302..1182562,1182621..1183399); ID=FBpp0085419; name=d4-PC; parent=FBgn0033015,FBtr0086083; dbxref=GB_protein:AAF57339.1,FlyBase:FBpp0085419,FlyBase_Annotation_IDs:CG2682-PC,REFSEQ:NP_724404,GB_protein:AAF57339; MD5=5ac0546da810c5332733c9b84b73a501; length=495; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • D4, isoform C OS=Drosophila melanogaster GN=d4 PE=4 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2R:join(1181770..1182217,1182302..1182562,1182621..1183399); ID=FBpp0085419; name=d4-PC; parent=FBgn0033015,FBtr0086083; dbxref=GB_protein:AAF57339.1,FlyBase:FBpp0085419,FlyBase_Annotation_IDs:CG2682-PC,REFSEQ:NP_724404,GB_protein:AAF57339,FlyMine:FBpp0085419,modMine:FBpp0085419; MD5=5ac0546da810c5332733c9b84b73a501; length=495; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:join(5294265..5294712,5294797..5295057,5295116..5295894); ID=FBpp0085419; name=d4-PC; parent=FBgn0033015,FBtr0086083; dbxref=GB_protein:AAF57339.1,FlyBase:FBpp0085419,FlyBase_Annotation_IDs:CG2682-PC,REFSEQ:NP_724404,GB_protein:AAF57339,FlyMine:FBpp0085419,modMine:FBpp0085419; MD5=5ac0546da810c5332733c9b84b73a501; length=495; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:join(5294265..5294712,5294797..5295057,5295116..5295894); ID=FBpp0085419; name=d4-PC; parent=FBgn0033015,FBtr0086083; dbxref=GB_protein:AAF57339.1,FlyBase:FBpp0085419,FlyBase_Annotation_IDs:CG2682-PC,REFSEQ:NP_724404,GB_protein:AAF57339,FlyMine:FBpp0085419,modMine:FBpp0085419; MD5=5ac0546da810c5332733c9b84b73a501; length=495; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Isoform of Q7K3G5, D4, isoform C OS=Drosophila melanogaster GN=d4 PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0085419 type=protein; loc=2R:join(5294265..5294712,5294797..5295057,5295116..5295894); ID=FBpp0085419; name=d4-PC; parent=FBgn0033015,FBtr0086083; dbxref=GB_protein:AAF57339.1,FlyBase:FBpp0085419,FlyBase_Annotation_IDs:CG2682-PC,REFSEQ:NP_724404,GB_protein:AAF57339,FlyMine:FBpp0085419,modMine:FBpp0085419; MD5=5ac0546da810c5332733c9b84b73a501; length=495; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:join(5294265..5294712,5294797..5295057,5295116..5295894); ID=FBpp0085419; name=d4-PC; parent=FBgn0033015,FBtr0086083; dbxref=GB_protein:AAF57339.1,FlyBase:FBpp0085419,FlyBase_Annotation_IDs:CG2682-PC,REFSEQ:NP_724404,GB_protein:AAF57339,UniProt/TrEMBL:A1Z6E6,FlyMine:FBpp0085419,modMine:FBpp0085419; MD5=5ac0546da810c5332733c9b84b73a501; length=495; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 495 amino acids

    Gene Ontology:
    Cellular Component: nucleus [NAS]
    Biological Process: muscle organ development [IMP]
    regulation of transcription [NAS]
    dendrite morphogenesis [IMP]
    Molecular Function: transcription factor activity [NAS]
    zinc ion binding [IEA]
    protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASKSAYEKT LVVNIANFEK IQNFLNDKEK YKEILENSEN FNTRLCIERR LRMPFLDPQT  60
   61 GVAQTHCSLF MKKKQRMPGL RHGQIYTYPS SRWRKPKRQY LLNPNQSFRA YQYREHNLQH 120
  121 SHHQTHQHHH HIPSSGVAVP QNPHLAESAA IAATDGNSMG ASGDNDSKDS HANVEKEWFH 180
  181 DEMDTSHFHH GDEFEDDFDS DNDFDESYTS RGKRKKCSRP RRTNANVEGT PKRGRKGNRR 240
  241 KNAVEGESDR KRRAGGNSAN TSAAAAAAAA AVAHAACTAA AVASTGLYAS HSNSASPIPI 300
  301 NDDNSQSGLI LPTNISSSYD KTSSDAGASN DSIPLATMVA INAGLTTSNV CNAHPVQTGT 360
  361 NQTVFATGNK VKQRVERDIA QPSPYCDFCL GDQRENKKTN MPEELVSCSD CGRSGHPSCL 420
  421 QFTANMIISV KRYRWQCIEC KYCSICGTSD NDDQLLFCDD CDRGYHMYCL SPPLVTPPEG 480
  481 SWSCKLCMEE FHKIK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..78] MSA 1.10898 View MSA. No confident structure predictions are available.
    2 View Details [79..206] deduced N/A No confident structure predictions are available.
    3 View Details [207..368] deduced N/A No confident structure predictions are available.
    4 View Details [369..495] PSI-BLAST 11.69897 No description for 2ysmA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.70

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle