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Protein Overview: mRpS18B-PB, mRpS...

General Information:
Name(s) found: mRpS18B-PB / FBpp0080871 [FlyBase]
mRpS18B-PA / FBpp0080870 [FlyBase]
Description(s) found:
Found 35 descriptions.
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  • The gene mitochondrial ribosomal protein S18B is referred to in FlyBase by the symbol Dmel\mRpS18B (CG10757, FBgn0032849). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:20096431..20098065. It has the cytological map location 38B6. Based on sequence similarity, it is predicted to have molecular function</span>: structural constituent of ribosome. Based on sequence similarity, it is predicted to be involved in the biological process</span>: translation. 4 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • The gene mitochondrial ribosomal protein S18B is referred to in FlyBase by the symbol Dmel\mRpS18B (CG10757, FBgn0032849). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:20096431..20098065. It has the cytological map location 38B6. Based on sequence similarity, it is predicted to have molecular function</span>: structural constituent of ribosome. Based on sequence similarity, it is predicted to be involved in the biological process</span>: translation. 4 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 204 amino acids

    Gene Ontology:
    Cellular Component: mitochondrial small ribosomal subunit [ISS]
    Biological Process: translation [ISS]
    Molecular Function: structural constituent of ribosome [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPIARGIYI GLVNITRNSR GALHTASALR CKAETSTEEN NAAATEGEGE DNASGSAPDP  60
   61 KDRSKPIPVE TSIRYLKSAA YKQTYGEDFV WTQYRRNHKG MYAPRKTRKT CIRQNRISTG 120
  121 NPCPICRDEY LVLDYRNTEL LEQFISPHSG DVLSYSKTGL CQKSHLRLMV AVQQARDSGY 180
  181 LTYDVPFREY DYSEYYGQEQ KQKA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..97] MSA 1.025996 View MSA. No confident structure predictions are available.
    2 View Details [98..204] PSI-BLAST 22.045757 No description for 1vs5R was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • structural constituent of ribosome
    		•  9.70687222528823 bayes_pls_golite062009
  • structural molecule activity
    		•  9.13243988503345 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle