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Protein Overview: sNPF-PB

General Information:
Name(s) found: sNPF-PB / FBpp0080859 [FlyBase]
Description(s) found:
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  • gi|24585363|ref|NP_724239.1| short neuropeptide F precursor, isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|22946884|gb|AAN11060.1| short neuropeptide F precursor, isoform B [Drosophila melanogaster] [NCBI NR]
  • Short neuropeptide F OS=Drosophila melanogaster GN=sNPF PE=1 SV=4 [Swiss-Prot]
  • The gene short neuropeptide F precursor is referred to in FlyBase by the symbol Dmel\sNPF (CG13968, FBgn0032840). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:20027915..20056375. It has the cytological map location 38B1. Based on sequence similarity, it is predicted to have molecular function</span>: neuropeptide hormone activity. There is experimental evidence that it is involved in the biological process</span>: larval feeding behavior; multicellular organism growth; adult feeding behavior; positive regulation of multicellular organism growth. 10 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • >CG13968-PB translation from_gene[CG13968 sNPF FBgn0032840] seq_release:3 mol_weight=32546 cds_boundaries:(2L:20,032,190..20,033,297[+]) aa_length:281 transcript_info:[CG13968-RB seq_release:3] gene_info:[gene symbol:sNPF FBgn0032840 gene_boundaries:(2 [hmr_yeast5_DM3-1_pombe.fasta]
  • CG13968-PB, isoform B [Drosophila melanogaster]gi|24585363|ref|NP_724239.1| CG13968-PB [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2L:join(20054113..20054221,20054279..20054736,20054879..20055109,20055176..20055223); ID=FBpp0080859; name=sNPF-PB; parent=FBgn0032840,FBtr0081327; dbxref=GB_protein:AAN11060.1,FlyBase:FBpp0080859,FlyBase_Annotation_IDs:CG13968-PB,REFSEQ [fly-100309-contam.fasta]
  • short neuropeptide F precursor CG13968-PB, isoform B [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG13968-PB, isoform B [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2L:join(20054113..20054221,20054279..20054736,20054879..20055109,20055176..20055223); ID=FBpp0080859; name=sNPF-PB; parent=FBgn0032840,FBtr0081327; dbxref=GB_protein:AAN11060.1,FlyBase:FBpp0080859,FlyBase_Annotation_IDs:CG13968-PB,REFSEQ:NP_724239,GB_protein:AAN11060; MD5=be3c14cfb0b6a0030b7f312f4f6e9079; length=281; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2L:join(20054113..20054221,20054279..20054736,20054879..20055109,20055176..20055223); ID=FBpp0080859; name=sNPF-PB; parent=FBgn0032840,FBtr0081327; dbxref=GB_protein:AAN11060.1,FlyBase:FBpp0080859,FlyBase_Annotation_IDs:CG13968-PB,REFSEQ:NP_724239,GB_protein:AAN11060; MD5=be3c14cfb0b6a0030b7f312f4f6e9079; length=281; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Isoform B of Short neuropeptide F OS=Drosophila melanogaster GN=sNPF [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2L:join(20054113..20054221,20054279..20054736,20054879..20055109,20055176..20055223); ID=FBpp0080859; name=sNPF-PB; parent=FBgn0032840,FBtr0081327; dbxref=GB_protein:AAN11060.1,FlyBase:FBpp0080859,FlyBase_Annotation_IDs:CG13968-PB,REFSEQ:NP_724239,GB_protein:AAN11060,FlyMine:FBpp0080859,modMine:FBpp0080859; MD5=be3c14cfb0b6a0030b7f312f4f6e9079; length=281; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2L:join(20054113..20054221,20054279..20054736,20054879..20055109,20055176..20055223); ID=FBpp0080859; name=sNPF-PB; parent=FBgn0032840,FBtr0081327; dbxref=GB_protein:AAN11060.1,FlyBase:FBpp0080859,FlyBase_Annotation_IDs:CG13968-PB,REFSEQ:NP_724239,GB_protein:AAN11060,FlyMine:FBpp0080859,modMine:FBpp0080859; MD5=be3c14cfb0b6a0030b7f312f4f6e9079; length=281; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2L:join(20054113..20054221,20054279..20054736,20054879..20055109,20055176..20055223); ID=FBpp0080859; name=sNPF-PB; parent=FBgn0032840,FBtr0081327; dbxref=GB_protein:AAN11060.1,FlyBase:FBpp0080859,FlyBase_Annotation_IDs:CG13968-PB,REFSEQ:NP_724239,GB_protein:AAN11060,FlyMine:FBpp0080859,modMine:FBpp0080859; MD5=be3c14cfb0b6a0030b7f312f4f6e9079; length=281; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0080859 type=protein; loc=2L:join(20054113..20054221,20054279..20054736,20054879..20055109,20055176..20055223); ID=FBpp0080859; name=sNPF-PB; parent=FBgn0032840,FBtr0081327; dbxref=GB_protein:AAN11060.1,FlyBase:FBpp0080859,FlyBase_Annotation_IDs:CG13968-PB,REFSEQ:NP_724239,GB_protein:AAN11060,FlyMine:FBpp0080859,modMine:FBpp0080859; MD5=be3c14cfb0b6a0030b7f312f4f6e9079; length=281; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2L:join(20054113..20054221,20054279..20054736,20054879..20055109,20055176..20055223); ID=FBpp0080859; name=sNPF-PB; parent=FBgn0032840,FBtr0081327; dbxref=GB_protein:AAN11060.1,FlyBase:FBpp0080859,FlyBase_Annotation_IDs:CG13968-PB,REFSEQ:NP_724239,GB_protein:AAN11060,UniProt/Swiss-Prot:Q9VIQ0,FlyMine:FBpp0080859,modMine:FBpp0080859; MD5=be3c14cfb0b6a0030b7f312f4f6e9079; length=281; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 281 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFHLKRELSQ GCALALICLV SLQMQQPAQA EVSSAQGTPL SNLYDNLLQR EYAGPVVFPN  60
   61 HQVERKAQRS PSLRLRFGRS DPDMLNSIVE KRWFGDVNQK PIRSPSLRLR FGRRDPSLPQ 120
  121 MRRTAYDDLL ERELTLNSQQ QQQQLGTEPD SDLGADYDGL YERVVRKPQR LRWGRSVPQF 180
  181 EANNADNEQI ERSQWYNSLL NSDKMRRMLV ALQQQYEIPE NVASYANDED TDTDLNNDTS 240
  241 EFQREVRKPM RLRWGRSTGK APSEQKHTPE ETSSIPPKTQ N

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle