YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	sNPF-PB
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFHLKRELSQ GCALALICLV SLQMQQPAQA EVSSAQGTPL SNLYDNLLQR EYAGPVVFPN  60
   61 HQVERKAQRS PSLRLRFGRS DPDMLNSIVE KRWFGDVNQK PIRSPSLRLR FGRRDPSLPQ 120
  121 MRRTAYDDLL ERELTLNSQQ QQQQLGTEPD SDLGADYDGL YERVVRKPQR LRWGRSVPQF 180
  181 EANNADNEQI ERSQWYNSLL NSDKMRRMLV ALQQQYEIPE NVASYANDED TDTDLNNDTS 240
  241 EFQREVRKPM RLRWGRSTGK APSEQKHTPE ETSSIPPKTQ N

Type	Start	End	Confidence
Signal Peptide	1	30	0.99
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	281	0.99