YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CG13083-PA

General Information:
Name(s) found: CG13083-PA / FBpp0080782 [FlyBase]
Description(s) found:
SHOW ONLY BEST
  • gi|7298590|gb|AAF53807.1| CG13083, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|24585242|ref|NP_609972.1| CG13083, isoform A [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG13083 (CG13083, FBgn0032789). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:19487524..19488531. It has the cytological map location 37E4. Its molecular function is unknown. The biological processes in which it is involved are not known. 2 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • >CG13083-PA translation from_gene[CG13083 CG13083 FBgn0032789] seq_release:3 mol_weight=31776 cds_boundaries:(2L:19,465,607..19,466,611[+]) aa_length:284 transcript_info:[CG13083-RA seq_release:3] gene_info:[gene symbol:CG13083 FBgn0032789 gene_boundar [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VIV7) CG13083 protein [DrosMelano7227.FASTAC.txt]
  • (AE003663) CG13083 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG13083-PA, isoform A [Drosophila melanogaster]gi|24585242|ref|NP_609972.1| CG13083-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2L:join(19487524..19488084,19488181..19488377,19488435..19488531); ID=FBpp0080782; name=CG13083-PA; parent=FBgn0032789,FBtr0081241; dbxref=FlyBase:FBpp0080782,FlyBase_Annotation_IDs:CG13083-PA,GB_protein:AAF53807.1,REFSEQ:NP_609972,GB_pr [fly-100309-contam.fasta]
  • CG13083-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2L:join(19487524..19488084,19488181..19488377,19488435..19488531); ID=FBpp0080782; name=CG13083-PA; parent=FBgn0032789,FBtr0081241; dbxref=FlyBase:FBpp0080782,FlyBase_Annotation_IDs:CG13083-PA,GB_protein:AAF53807.1,REFSEQ:NP_609972,GB_protein:AAF53807; MD5=19f1eaee3428684e58f8a550db80ce74; length=284; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2L:join(19487524..19488084,19488181..19488377,19488435..19488531); ID=FBpp0080782; name=CG13083-PA; parent=FBgn0032789,FBtr0081241; dbxref=FlyBase:FBpp0080782,FlyBase_Annotation_IDs:CG13083-PA,GB_protein:AAF53807.1,REFSEQ:NP_609972,GB_protein:AAF53807; MD5=19f1eaee3428684e58f8a550db80ce74; length=284; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG13083, isoform A OS=Drosophila melanogaster GN=CG13083 PE=1 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • CG13083, isoform A OS=Drosophila melanogaster GN=CG13083 PE=2 SV=1 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
    • Organism: Drosophila melanogaster
    Length: 284 amino acids

    Gene Ontology:
    Cellular Component: chorion [IDA]
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVRLTLLTI CIYLCAAAAE DLDSIHEIRS EVEELIKGTE ELNHGLQKVK DVQKGIEEKF  60
   61 KHQRDEIELI AGLEVAIAKL ESNVQSSFQA TASGVGNLTA IVNAIQGQNE NSIRNLTKVE 120
  121 LEIRKALEQV AANQNKYEQN LNEVASSVNS HLSEIQQLLS QAVIGELIGL DNKAKVLQEQ 180
  181 QRNIVGQSES LNSIEHTVHG VQVATSQVDH KLAALLNNQK NIERTLDGCK HKNPSHQKPH 240
  241 EIWTHPEHAP IYKPKPEGNQ GYENVYASQE EAEYLYKLWY GKGQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..284] PSI-BLAST 13.522879 No description for 2ch7A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle