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Protein Overview: CG10341-PA

General Information:
Name(s) found: CG10341-PA / FBpp0080647 [FlyBase]
Description(s) found:
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  • gi|74869367|sp|Q9VJ62.2|NAF1_DROME RecName: Full=H/ACA ribonucleoprotein complex non-core subunit NAF1 [NCBI NR]
  • gi|22946771|gb|AAF53693.2| CG10341, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|19921494|ref|NP_609898.1| CG10341, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|15291489|gb|AAK93013.1| GH23387p [Drosophila melanogaster] [NCBI NR]
  • H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Drosophila melanogaster GN=CG10341 PE=1 SV=2 [Swiss-Prot]
  • This gene is referred to in FlyBase by the symbol Dmel\CG10341 (CG10341, FBgn0032701). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:18698686..18700647. It has the cytological map location 37A1. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: snoRNA binding; pseudouridine synthase activity. The biological processes in which it is involved are not known. 2 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • >CG10341-PA translation from_gene[CG10341 CG10341 FBgn0032701] seq_release:3 mol_weight=62271 cds_boundaries:(2L:18,676,918..18,678,668[+]) aa_length:564 transcript_info:[CG10341-RA seq_release:3] gene_info:[gene symbol:CG10341 FBgn0032701 gene_boundar [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VJ62) CG10341 protein (GH23387p) [DrosMelano7227.FASTAC.txt]
  • CG10341-PA [Drosophila melanogaster]gi|15291489|gb|AAK93013.1| GH23387p [Drosophila melanogaster]gi|19921494|ref|NP_609898.1| CG10341-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2L:join(18698835..18698976,18699036..18700588); ID=FBpp0080647; name=CG10341-PA; parent=FBgn0032701,FBtr0081097; dbxref=GB_protein:AAF53693.2,FlyBase:FBpp0080647,FlyBase_Annotation_IDs:CG10341-PA,REFSEQ:NP_609898,GB_protein:AAF53693; MD5 [fly-100309-contam.fasta]
  • CG10341-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • GH23387p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2L:join(18698835..18698976,18699036..18700588); ID=FBpp0080647; name=CG10341-PA; parent=FBgn0032701,FBtr0081097; dbxref=GB_protein:AAF53693.2,FlyBase:FBpp0080647,FlyBase_Annotation_IDs:CG10341-PA,REFSEQ:NP_609898,GB_protein:AAF53693; MD5=0fb6f7ee1640c8ee58e4079478248dba; length=564; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2L:join(18698835..18698976,18699036..18700588); ID=FBpp0080647; name=CG10341-PA; parent=FBgn0032701,FBtr0081097; dbxref=GB_protein:AAF53693.2,FlyBase:FBpp0080647,FlyBase_Annotation_IDs:CG10341-PA,REFSEQ:NP_609898,GB_protein:AAF53693; MD5=0fb6f7ee1640c8ee58e4079478248dba; length=564; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • type=protein; loc=2L:join(18698835..18698976,18699036..18700588); ID=FBpp0080647; name=CG10341-PA; parent=FBgn0032701,FBtr0081097; dbxref=GB_protein:AAF53693.2,FlyBase:FBpp0080647,FlyBase_Annotation_IDs:CG10341-PA,REFSEQ:NP_609898,GB_protein:AAF53693,FlyMine:FBpp0080647,modMine:FBpp0080647; MD5=0fb6f7ee1640c8ee58e4079478248dba; length=564; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2L:join(18698835..18698976,18699036..18700588); ID=FBpp0080647; name=CG10341-PA; parent=FBgn0032701,FBtr0081097; dbxref=GB_protein:AAF53693.2,FlyBase:FBpp0080647,FlyBase_Annotation_IDs:CG10341-PA,REFSEQ:NP_609898,GB_protein:AAF53693,FlyMine:FBpp0080647,modMine:FBpp0080647; MD5=0fb6f7ee1640c8ee58e4079478248dba; length=564; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2L:join(18698835..18698976,18699036..18700588); ID=FBpp0080647; name=CG10341-PA; parent=FBgn0032701,FBtr0081097; dbxref=GB_protein:AAF53693.2,FlyBase:FBpp0080647,FlyBase_Annotation_IDs:CG10341-PA,REFSEQ:NP_609898,GB_protein:AAF53693,FlyMine:FBpp0080647,modMine:FBpp0080647; MD5=0fb6f7ee1640c8ee58e4079478248dba; length=564; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0080647 type=protein; loc=2L:join(18698835..18698976,18699036..18700588); ID=FBpp0080647; name=CG10341-PA; parent=FBgn0032701,FBtr0081097; dbxref=GB_protein:AAF53693.2,FlyBase:FBpp0080647,FlyBase_Annotation_IDs:CG10341-PA,REFSEQ:NP_609898,GB_protein:AAF53693,FlyMine:FBpp0080647,modMine:FBpp0080647; MD5=0fb6f7ee1640c8ee58e4079478248dba; length=564; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2L:join(18698835..18698976,18699036..18700588); ID=FBpp0080647; name=CG10341-PA; parent=FBgn0032701,FBtr0081097; dbxref=GB_protein:AAF53693.2,FlyBase:FBpp0080647,FlyBase_Annotation_IDs:CG10341-PA,REFSEQ:NP_609898,GB_protein:AAF53693,UniProt/Swiss-Prot:Q9VJ62,FlyMine:FBpp0080647,modMine:FBpp0080647; MD5=0fb6f7ee1640c8ee58e4079478248dba; length=564; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 564 amino acids

    Gene Ontology:
    Cellular Component: box H/ACA snoRNP complex [IEA]
    Biological Process: NONE FOUND
    Molecular Function: snoRNA binding [IEA]
    pseudouridine synthase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESEQPAAVK ASAPIEEPQS TETAVELGKH STLKADLSID KLETATTEAT NAVVEPVEME  60
   61 QQVENELVNE STQAMTSTTT QEKVVGSVNN LVEEQQCVEM EFETSSDLVV QGSPSEESKK 120
  121 VASDASATVT APQVQPAPHV DSSPQASGLS LLAAYSSDDS DDEKVTPVQN GDNDVIEVPV 180
  181 TDPASSTTAY RPVVAVSSDD ESSKSSSSSS DSDSDSEGEY LTVLRKKIDK RINTVDCDED 240
  241 DEDFDEDGAT GDRSRRRQPP KVRGEMLLDD LPPIHQLEIT VPEDECVELG KVQSIVDQLV 300
  301 LVSVLPNSML FDLDTVLFLE KGRKVLGEVF DVLGQVSDPL YCVRFNSNKQ ILDRGIKIGD 360
  361 VVYCAPKTEH TQFVILSKLM QVRGSDASWE HDVEPPARYV DHSDDEEERE ARAEQRKRRQ 420
  421 RDRTNSTDSV DTVTSVATTA TKASSVAPPP RQRGRRGQRE SFRQSQRPSI NQHNQNQPQD 480
  481 EQYNFHPSYN PGSWHSNYYQ NYHQAAANFN MAQQHPGMPF PVPNYGYGMP YAMPPMYPHM 540
  541 YPPPPPFAPP PPNNQSHQGQ PPPS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle