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Protein Overview: Cyt-c-d-PA, FBpp...

General Information:
Name(s) found: FBpp0307140 [FlyBase]
Cyt-c-d-PA / FBpp0080445 [FlyBase]
Description(s) found:
Found 31 descriptions.
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  • type=protein; loc=2L:16719135..16719452; ID=FBpp0307140; name=Cyt-c-d-PB; parent=FBgn0086907,FBtr0335141; dbxref=REFSEQ:NP_001260509,GB_protein:AGB93044,FlyBase:FBpp0307140,FlyBase_Annotation_IDs:CG13263-PB; MD5=f05f4b915bcdfd236222ebfcff9fd999; length=105; release=r5.56; species=Dmel; [FlyBase]
  • The gene Cytochrome c distal is referred to in FlyBase by the symbol Dmel\Cyt-c-d (CG13263, FBgn0086907). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:16715858..16719642. It has the cytological map location 36A11. There is experimental evidence that it has the molecular function</span>: electron carrier activity. There is experimental evidence that it is involved in the biological process</span>: activation of caspase activity; sperm individualization; regulation of compound eye retinal cell programmed cell death. 16 alleles are reported. The phenotypes of these alleles are annotated with: tertiary pigment cell; major mitochondrial derivative; spermatid; spermatid axoneme; secondary pigment cell; minor mitochondrial derivative. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 105 amino acids

    Gene Ontology:
    Cellular Component: mitochondrial matrix [ISS][NAS]
    mitochondrion [IDA][IEP]
    mitochondrial inner membrane [ISS]
    Biological Process: oxidative phosphorylation [ISS]
    sperm individualization [IMP]
    activation of caspase activity [IMP]
    regulation of compound eye retinal cell programmed cell death [IMP]
    Molecular Function: electron transporter, transferring electrons from CoQH2-cytochrome c reductase complex and cytochrome c oxidase complex activity [ISS]
    electron carrier activity [IDA][ISS][NAS]
    heme binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSGDAENGK KIFVQKCAQC HTYEVGGKHK VGPNLGGVVG RKCGTAAGYK YTDANIKKGV  60
   61 TWTEGNLDEY LKDPKKYIPG TKMVFAGLKK AEERADLIAF LKSNK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..105] PSI-BLAST 35.045757 Crystal structure of cytochrome C from bovine heart at 1.5 A resolution.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle