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Protein Overview: mRpL4-PA

General Information:
Name(s) found: mRpL4-PA / FBpp0080401 [FlyBase]
Description(s) found:
Found 23 descriptions.
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  • The gene mitochondrial ribosomal protein L4 is referred to in FlyBase by the symbol Dmel\mRpL4 (CG5818, FBgn0001995). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:16328053..16329128. It has the cytological map location 35F1. Based on sequence similarity, it is predicted to have molecular function</span>: structural constituent of ribosome. Based on sequence similarity, it is predicted to be involved in the biological process</span>: translation. 6 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 296 amino acids

    Gene Ontology:
    Cellular Component: mitochondrial large ribosomal subunit [ISS]
    Biological Process: translation [ISS]
    Molecular Function: structural constituent of ribosome [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNNILKTSR QVLYPVARTF SRSGNHGNVV TEAAATVGAP PATRSPLILP QDYTDCLPVS  60
   61 RNTARQAWIE NTDAVAERKV GLIELHPDVF AAQPRVDIIQ ENVEWQSKYR YVSMAHTKTR 120
  121 AEVRGGGRKP WPQKGGGRAR HGSLRSPMLK GGGVVHGPRS PTTHFYMLPF YKRVLGLTST 180
  181 LSVKLAQDDL HIIDNVDIPT GDAEFLKDLI AERNWGPSVL IVDEDHMFPA NICQASDDLG 240
  241 YVNLMPTFGL NVYSMLKHDT LVLTVAAVKH LEQRLLYQLN RNDAASKGGK FKLDQV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..77] deduced N/A No confident structure predictions are available.
    2 View Details [78..296] PSI-BLAST 55.30103 No description for 2ftcD was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle